Mycobacterium shottsii: MSHO_27350
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Entry
MSHO_27350 CDS
T07303
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
msho
Mycobacterium shottsii
Pathway
msho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MSHO_27350 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msho03400
]
MSHO_27350 (recD)
Enzymes [BR:
msho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MSHO_27350 (recD)
DNA repair and recombination proteins [BR:
msho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSHO_27350 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
RecD_N
AAA_22
Helicase_RecD
UvrD-helicase
SH3_13
PhoH
AAA_16
AAA_28
nSTAND3
AAA_25
TraI_hel_assoc_N
T2SSE
Mg_chelatase
AAA_5
NTPase_1
SRP54
TrwB_AAD_bind
NACHT
AAA_29
CbiA
Motif
Other DBs
NCBI-ProteinID:
BBX57390
UniProt:
A0A7I7LCL3
LinkDB
All DBs
Position
complement(2625643..2627406)
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AA seq
587 aa
AA seq
DB search
MTIEVVDPADWRQAASASGPLRTFNEAGVIDAADVHVAQRLAAMSGESDPVVLLAIAFVV
RALRGGSVCVDLSTIEAQVGIAELPWPAAGEWLAAVRASPLVGSPTVLRLHEDNLVYLDR
YWREEQQVADDIAALLAARASASSPAIEVNRLFPPGYEEQRAAAKIALAQGLTVLTGGPG
TGKTTTVARLLALFAEQAQLAGKARLRIALAAPTGKAAARLHEAVQSQIDKLDAVDQQRV
RGLQATTLHRLLGSRPDTSSRFRHHRGNRLPHDVIVIDETSMVSLTMMARLLEAVRPQTR
LLLVGDPDQLASVEAGAVLADLVDGLGARHDTHVAALRRLHRFGESIGQLAAAIRGGDAD
RVVEILRAGDDHIEWINAADPTPQLRNVLLPQALELRHAGALGDTAAALATLDEQRLLCA
HRRGPYGIAHWNHQVQRWLTEATGEPIWSSWYAGRPVLVTANDYGLGVYNGDTGVAVLDG
TNRAATPGALRVVIAGAQEPLKFATSRLSDVETMHAMTIHKSQGSQADDVTVLLPPADSR
LLTRELFYTAVTRAARKVRIVGPECDVRAAIARRAIRATGLRSRLQP
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgaggttgtcgacccggcggactggcggcaggccgcgagcgcgtccggaccg
ctgcggacgttcaatgaagccggtgtcatcgatgcggccgatgtccatgtcgcgcaacgc
cttgcggccatgtctggcgagtccgacccggtggtgttgctggccatcgcgttcgtggtg
cgcgcgctgcggggcggttcggtgtgtgtcgacctgtccaccatcgaggcacaagtcggg
atcgccgaactcccctggccggcggccggcgaatggctggccgcggttcgggccagcccg
ctggtcgggtcaccgacggtgctgcgcctgcacgaggacaatctggtctatctggaccgg
tactggcgcgaagaacagcaggtcgccgacgacatcgcggccctgctggccgcccgggcc
agcgcatcgagcccggctatcgaggtcaaccggctgtttccacccggctacgaagagcag
cgcgcggccgcgaagattgcgctggcgcagggcttgacggtgctgaccggtggaccgggg
accggtaaaaccaccacggtggcgcggctgttggccctgttcgccgagcaggcacagctc
gccggcaaggcgcgactgcgcattgcactggccgcaccgaccggcaaggccgcggccaga
ctgcacgaggcggtgcagtcgcagatcgacaaactcgatgccgtagatcagcaacgggtt
cgtgggctacaggcgaccacattgcaccggctgctgggcagccggcccgacacctcatca
cggtttcgccatcatcgcggcaatcggctgccgcatgacgtgatcgtcatcgatgagacg
tcgatggtatcgctgaccatgatggctcgcctgctcgaagcggtgcgtccgcagacgcgg
ctgcttcttgtcggcgatcccgaccaactggcgtcggtggaggcgggcgcggtgttggcc
gacctggtggacggactgggcgcgcgccacgacacccacgtcgcggcactgcgcagactg
catcggttcggcgagtcgatcggccagttggcggcggccatccgcggcggcgacgccgac
cgggttgtcgagatcttgcgggcgggcgacgaccacatcgagtggatcaacgccgccgac
ccgaccccgcagctgcgcaatgtgctgctgccacaagccctcgagcttcgacacgccggc
gcgctcggtgataccgcggccgcgctggcaacactcgacgagcaacggctgttgtgcgcg
caccggcgtggaccgtatggaatcgcgcactggaaccaccaggtgcagagatggctcacc
gaagcaacgggcgagccgatctggtcgagctggtatgccggacggccggtgttggtgacc
gccaacgactatgggctcggcgtgtacaacggcgacaccggggtggccgtcctggatggc
acgaaccgcgccgcgactccgggcgcgctgcgggtcgtcatcgccggcgcgcaggagccg
ctgaagttcgcgaccagccgactatctgatgtggaaaccatgcatgccatgacgatccac
aagagccagggcagtcaagccgacgacgtgaccgtgctgctgccgccggcggattcccgg
ttactgacccgcgaactgttctacacggcggtcacccgggccgcccgcaaggtgcgcatc
gtcgggccggaatgcgacgtacgggccgcgatcgcgcgccgggcgatccgggcgaccggg
ttgcgttcccgattgcagccgtga
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