Mycobacterium shottsii: MSHO_46480
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Entry
MSHO_46480 CDS
T07303
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
msho
Mycobacterium shottsii
Pathway
msho03030
DNA replication
msho03430
Mismatch repair
msho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSHO_46480
03430 Mismatch repair
MSHO_46480
03440 Homologous recombination
MSHO_46480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msho03032
]
MSHO_46480
03400 DNA repair and recombination proteins [BR:
msho03400
]
MSHO_46480
Enzymes [BR:
msho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSHO_46480
DNA replication proteins [BR:
msho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSHO_46480
DNA repair and recombination proteins [BR:
msho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSHO_46480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
BBX59303
UniProt:
A0A7I7LIV2
LinkDB
All DBs
Position
4504171..4506195
Genome browser
AA seq
674 aa
AA seq
DB search
MSVRVPNVTAMGVTGGTQLSLTGLDPAAFADIALPDTDLTDPAAAQADDVSLRETTFVVV
DLETTGGRATGTEASPPDAITEIGAVKVRGGVILGEFATLVDPQRSIPPQIVRLTGITTA
MLCDAPTIDSVLPMFFEFVGNSVLVAHNAGFDIGFLRAAAGRCDIAWPGSKVLCTVRLAR
RVLSREEAPSVRLAALARLFSVATQPTHRALDDARATVEVLHALIERVGNQGVHSYAELR
AYLPGVTPAQRRKRVLADGLPHRPGIYLFRGPSGEVLYVGTAVDLRRRVSQYFNGADSRG
RMKEMVALAGAVDHVECAHALEAGVRELRMLAAHAPPYNRRSRFPHRWWWVTLTDEAFPR
LSVVRAPRHDRVVGPFRSRTDATETAALLARFTGVRTCTKRLARSALHGPACPELEVSAC
PAARNVTAEGYADAAKRAADLIEGVDNTALTAAVHQVSDLAERHRYESAARLRDHIATAV
EVLWRGQRLRALVALPELVAAAPDGCGGYQFAVIRHGQLAAAGNSRRGTPPMPVVDALHA
GAQTILPAPAPLGGALVEETALIARWLATPGVRIVRVTGAEHTADRAESAGWTSPLRSAG
PWAAWAAAARSARLAAEQVSQGDPRGRPDGGRQSDVLAEAHPSREQLLGRTAVDSHRGAL
QPVLPGGEPFSAAG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgcgagtgcctaacgtcacggccatgggtgtgacgggtggaactcagctgagt
ctcaccgggctcgatccggccgcctttgcggacatcgccttaccggacaccgacctcact
gacccggcggccgcccaggcagacgacgtgtcgctgcgcgaaaccaccttcgtggtcgtg
gacctggagaccaccggcggacgagcgacgggcactgaagcatcgccgccggacgccatc
accgagatcggggccgtcaaggtacgtggtggcgtgatcctgggcgaattcgcgaccctg
gtcgacccgcaacgcagcatcccaccccagatcgtgcgattgaccggaatcaccacggcc
atgctgtgtgatgccccgacgatcgactccgtcctgccgatgttcttcgagttcgttggc
aactccgtcctggtcgcccacaacgccgggttcgatatcgggttcctgcgggcggccgca
gggcgctgcgacatcgcgtggccgggatcgaaggtgctgtgcacggtccggctggctcgc
cgagtgctcagccgcgaagaagcacccagcgtgcggttggccgctttggcgcgcttgttt
tccgtcgccacccaacccacacaccgcgccctcgacgacgcgcgcgccactgtcgaggtg
ttgcatgccctgattgagcgggtgggcaaccagggcgtgcattcctacgccgagctgcgt
gcatacctaccgggcgtgacgccggcacagcgtcgcaagcgagtgctcgccgacgggctg
ccgcaccgcccggggatctatctgttccgagggccatcgggcgaagtcctctatgtgggc
accgcggtcgacttgcgccgccgggtcagtcagtacttcaacggcgccgattctcggggc
cggatgaaggagatggtcgccctggccggcgccgtcgaccatgtcgagtgcgcacatgcc
ctcgaggccggggtccgtgaactgcggatgcttgccgcgcatgcaccgccgtacaaccgt
cgatcgaggttcccgcaccgttggtggtgggtgacgctcaccgacgaggcgtttccccgc
ctatcggtagttcgtgctccccggcatgaccgcgttgtcggcccgtttcggtcgcgcacc
gacgcgacagaaacggcggccctgctagcgcgcttcaccggtgtcagaacctgcaccaag
cggctggcccgctcggcactgcatggtccggcttgcccagagttggaggtgtcggcctgc
cccgccgcgcgcaacgtcaccgccgaggggtacgccgacgcggccaagcgtgcggccgac
ttgatcgagggagtggataacaccgcactgaccgcggccgtgcaccaagtcagcgacctg
gccgagcggcaccgctatgagagcgcggcacggctgcgcgaccacatcgccacagctgtc
gaagtgctctggcgtggccaacggctgcgcgcgctggtagccctgcccgagctggtcgcg
gccgctcccgatggctgcggcggctaccagttcgcggtgatccgccacggccagctcgca
gccgccggtaattcccgacgtgggacaccgccgatgccggtggtcgacgccctccacgcc
ggagcgcaaacgatcttgccggcaccggcgccactcggcggcgcgctggtagaagagacc
gcgctgattgcccgctggctggcgaccccgggagtgcggatcgtgcgagtcaccggcgct
gagcacactgccgaccgtgcggagtccgccggctggacttcaccgctgagatcagccgga
ccgtgggcggcatgggcggctgcggcgcgttcggcgcggctggccgcagagcaggttagc
caaggagatccgcgtggtcgcccggatggcggccggcaatcagacgtgctggctgaagcg
cacccatcgcgcgagcagttgctcggccgcaccgctgtcgatagccaccgcggcgcgttg
cagcccgtcctgccaggcggggagccattcagcgcggctggatag
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