Mycobacterium shottsii: MSHO_48110
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Entry
MSHO_48110 CDS
T07303
Name
(GenBank) hypothetical protein
Organism
msho
Mycobacterium shottsii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
nSTAND1
WDR55
Beta-prop_IFT122_1st
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Pkinase
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Ge1_WD40
Beta-prop_SCAP
Beta-prop_Vps41
PK_Tyr_Ser-Thr
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_HPS5
RMC1_N
Beta-prop_WDR19_1st
Beta-prop_DCAF12
PROPPIN
Beta-prop_SPT8
Beta-prop_IP5PC_F
AAA_16
APH
Kdo
ABC1
Pkinase_fungal
Motif
Other DBs
NCBI-ProteinID:
BBX59466
UniProt:
A0A7I7LHD5
LinkDB
All DBs
Position
4660873..4665585
Genome browser
AA seq
1570 aa
AA seq
DB search
MGRDVAIKILPADRANEPGFRARFSREALIAARLTDPHIIPVHDTGEIDGQLYLVMPIIN
GVDLEVALQRDGPMTPARAVGMVEQIAAALDAAHTHGLVHRDVKPSNALMTDQGFVYLID
FGLAQDGTGAKLTAESRTAGTWAYMAPERMMSDVIDARADVYSLTCLLYECLTGEMPFPG
DRVALQMTAHLATPPPKPSERRSAVPAGFDDVIARGMAKQPDDRYPSAGELAMAAAAALA
TPPGGQTTTAGQRSQVATQTPKLGDSPSPRDTAPLGLEDIPRAGMGAASFPWPPPSQPDR
PPYLGWEPFQPVDAGVFFGRDAEVARAMDALRGMRASDETLFVVLGASGAGKSCFLRAGI
VPRLQRQASKYLVLDIVRPELKALTGACGLAQAICTTRQRLGLAQPPLGDIKEACASGDV
ARLRTWLLECRAAANRQPATGAADDTPVTLVLPLDQAEELFTSDAGVEAAGLLALIRDLA
LGTNGQDRLPLIVAATIRTDRYELMQTAPQLAGLQTKQFDLRPMDATQFNRVITGPAQRS
TDGGRPLYLDEELVRHLLADATGGADTLPLLSLTLAWLYRDYGSTGRLTLEPYAKRGGID
GVVQVEIHEILSSDPDERAQQLKLLRAAFIPWLATINPDNDQPMRRLVRWADLPDDSRPL
LERFLARRLLIKDLRDGEVIVEVALESLLRQWGDLSGWLADEVEDLKAADALERSAAEWE
KKRRDEAWLLRGSQLAAAENLAAKTGFRERLNQTHDYLLASRHCENERAELEKQRQRAEL
EAAKKLAAAETQAREQAQESAAALRQRSRVLRAVIAGTSVIAVIAVVGAATAVIMFNRAT
RQARDALAAQLDAQASLVFSGTIAESDIRALAATLAARQLRSNPAASRGAFYTATAALNT
TRIIIPTQAPVNTVAISPDGHTLASGGENGNIQLWNLTDPAHPGPLGPPLQGHSAGVVSI
AFSPDGHTLASGSHDGTIRLWNLTDPAHPGPLDPPLEDHSAGVAEVAFSPDGHTLASGSH
DGTIRLWNLTDPAHPRRLGQPLQSHTGSIASIAFNPDGHTLASGSHDGTIRLWNLTDPAH
PGPLGPPLEGHSASVAGVAFSPDGHTLASGSDDGTIRLWNLTDPAHPGPLGTPLQGHSAG
VASVAFGPDGNTLASGSVDDTVRLWDVTDPAQPGPLGQPLTGHHGTVWSIAFGPDGHTLT
TGSHDGTIRLWNLNTVLPVRGHTGPVRSAVFSPDVQTLASGSDDATIALWDLTNPGHPRQ
LGQPLRSHSDTVQSLAFSPDGHTLASGSDDTTIALWDLTNPGHPRQLGQPLRSHTRTVQS
LAFSPDGHTLASGSDDTTIALWDLTNPGHPRQLGQPLRSHTRTVQSLAFSPDGHTLASSS
DDTTIALWDLTDPAHAQQLGKPLYGYSSAVLGVAFSADGRLLASGSGDDTVVLWNLTDPA
HPSPLGHPLHGHSGYVNRVAFSPDGHTLASGSSDQTVQLWDLTNLTPAGLGQPLRGHTDS
VLGVAFSPDGHTLVSSSADATVRVWPTPLDATVTVLCSKLTSNISRHDWREWISPDVDYI
ALCPNLPVPR
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcgacgtggcgatcaaaatcttgcctgccgatcgggccaacgagccgggtttt
cgcgcgaggttcagccgggaagctctcatcgcggctcggttgaccgacccgcacatcatc
cccgtccacgacaccggcgaaattgacggccagttgtacctggtaatgccgatcatcaac
ggggttgacctcgaggtcgcgctccagcgcgacggtcccatgactccggcgcgagccgtt
ggaatggtcgaacagatcgcagccgctctggatgccgcccacacccatgggctggtgcac
cgggacgttaaaccatccaacgccttgatgaccgatcaaggattcgtctacctgatcgat
ttcggcctggcccaggacggtaccggcgccaaattgaccgccgagagccgcaccgccgga
acgtgggcatacatggcccccgaacgaatgatgagcgacgtcatcgatgcccgcgccgac
gtctattcgctgacatgtttgctctatgaatgccttaccggcgaaatgccattccctggt
gaccgggtagcgctgcaaatgacggcgcatctcgccacgcccccgccgaagccgagtgag
cgccggtccgccgtgcccgcgggattcgacgatgtcattgcccgtggcatggcgaaacaa
cccgacgatcgctaccccagcgctggtgaactcgcgatggcggcagctgccgcactggcg
acgccgccgggcgggcagaccaccacggccggacagcgctcccaggttgccacgcagacc
ccaaagctcggcgactcgccatcgcctagagacaccgcgccccttggactcgaggacatc
ccgcgcgccggcatgggggccgcgtcgttcccctggccaccaccgtcgcaaccggaccga
ccgccatacctcggatgggaacccttccagccggtcgacgcgggcgtctttttcggtcgg
gacgccgaggtggcgcgggcgatggacgccctgcgcgggatgcgtgcgagcgacgagacg
ctgttcgtggtgctgggtgcgtccggagccggcaagtcgtgttttctgcgtgcgggaatc
gtgccccggctgcaaagacaggcaagcaagtatctcgtcctcgacattgtccgccccgag
ctcaaggcgctcaccggcgcctgcgggctggcacaggcgatctgcaccacgcggcaacgc
ctcggcctggcacagccgccgctgggcgacatcaaggaagcgtgcgcgagcggcgacgtg
gcccggctgcggacgtggctgctggagtgccgtgccgccgccaaccgacaaccggcaacc
ggggctgccgatgacaccccggtgaccctggtgttgccgctggatcaggccgaagagctg
ttcaccagcgacgccggcgtggaggccgccgggttgttggcgctcatccgggatctggct
ctcggcacgaacggccaggacaggctgccattgattgtggcagcgacgatccgcaccgac
cgctacgagctgatgcagaccgctccacagcttgccgggctgcagaccaagcagttcgac
cttcggccgatggacgcaacccagttcaacagggtgatcaccggacctgcgcagcgttcg
acggacggcggacgcccgctgtacctcgacgaggaactggtgcgccacctgctcgccgac
gccaccggcggcgcagacacgctgccgctgctgtcactgacgctggcatggctgtaccgc
gactacgggtcgacgggccggctcactctcgagccttacgccaagcggggcggaatcgat
ggcgtcgtgcaagtcgagatccacgagattctgtcctcggatcccgacgagcgggcccag
caactcaaattgctgcgagcggcgttcatcccgtggctggccaccatcaatcccgacaac
gaccagccgatgcgccgcttggtacgctgggccgacctgcccgatgacagccgcccgctg
ctagagcggttcctggcccgccggttgctgatcaaagacctacgcgacggagaggtcatc
gtcgaggtcgccttggagagtctgctgcgccaatggggcgatctctccggctggctggcg
gacgaggtcgaagacctcaaggcggccgacgcgctggaacgcagcgccgccgagtgggag
aaaaagcggcgcgacgaagcctggctgctgcgcggatcccagctggccgcagccgaaaac
ctagccgccaaaaccggattccgcgaacgcctcaaccaaacccacgactacctgctggcc
tcccggcactgcgaaaacgaacgagccgagctcgagaagcaacgccagcgggccgaactc
gaggccgccaagaaactcgcggccgccgaaacccaagcgcgcgagcaggctcaagagagc
gccgccgccctacgacagcggtctcgcgtcctgcgcgcggtaatcgccggaacgtccgtc
atcgccgttatcgccgtggtaggcgccgcgaccgcggtgatcatgttcaaccgcgccacc
cgtcaagcccgcgacgcactggccgcccaactcgatgcgcaggcctcgttggtgttctcc
gggaccatcgcggagagcgatattcgcgcgctcgccgccaccctggcggcacgacagttg
cgttccaacccagccgccagccgcggcgcgttctacacggccaccgcggcgctgaacacc
actcgcatcatcatccccacgcaagcacccgttaacaccgttgcgataagtcccgacggg
cacaccctggcttccggcggcgagaacggcaacatccagctgtggaacctcaccgacccc
gcacacccaggccccctaggcccgcccctgcagggccacagcgccggtgtggtcagcatc
gcgttcagccccgacggacacaccctggcctccggcagccacgacggcaccatccgactg
tggaacctcaccgaccccgcacacccaggccccctggacccacccctggaagaccacagc
gccggtgtcgccgaggtcgcattcagccccgacggacacaccctggcctccggcagccac
gacggcaccatccgactatggaacctcaccgacccggcacacccgcgacggctcggccaa
cccctccaaagccacacgggcagcatcgccagcatcgcgttcaaccccgacggacacacc
ttggcctccggcagccacgacggcaccatccggctatggaacctcaccgaccccgcacac
ccaggccccctaggcccacccctggaaggccacagcgccagtgtcgccggcgtcgcgttc
agccccgacggacacaccctggcctccggcagcgacgacggcaccatccgactgtggaac
ctcaccgaccccgcacacccaggccccctgggcacacccctgcagggccacagcgccggt
gtggccagcgtggcgttcggtcccgacggaaacaccctggcctccggcagcgtcgacgac
acggtgcgactatgggacgtcacagatccagcgcagcccggtccgttggggcaacctctg
actggccaccacggaaccgtatggagcatcgcgttcgggcccgacggacacaccctgacc
accggaagccacgacggcaccatccggttgtggaacctcaatactgtgctgcccgttcgg
ggacataccggccccgtgcgcagtgcggtgttcagccctgacgtgcagacgctggcctcc
ggcagcgacgacgccaccatcgcgctatgggatctgaccaatccaggacacccgcgacag
ctcggccaacccctgcgcagccacagcgacaccgtacaaagcctcgccttcagccccgac
ggacacaccctggcctccggcagcgacgacaccaccatcgcgctatgggatctgaccaat
ccaggacacccgcgacagctcggccaacccctgcgcagccacactcgcaccgtgcaaagc
ctcgccttcagccccgacggacacaccctggcctccggcagcgacgacaccaccatcgcg
ctatgggatctgaccaatccaggacacccgcgacagctcggccaacccctgcgcagccac
actcgcaccgtgcaaagcctcgccttcagccccgacggacacaccctggcgtccagcagc
gacgacaccaccatcgcgctgtgggatctgaccgacccagcccacgcgcaacagctcggc
aaacccttgtatggctacagcagcgccgttcttggcgtggccttcagcgctgacggccgc
ttgctcgcttccggcagcggcgacgacaccgtcgtgctgtggaacctcaccgacccggcg
cacccgagcccgctggggcaccccctgcacggacatagcggatacgtgaatcgggtggcg
ttcagccccgacggtcatacgctagcgtcgggcagttctgaccaaaccgtgcagctctgg
gacctcaccaatctgacccctgccgggctaggccaacccctgcggggccacaccgacagc
gtccttggtgtggcgttcagccccgacgggcacaccttggtgtccagcagcgccgacgct
acggtgcgggtctggcccacgccgctggatgccaccgtcacggttctgtgttcgaagctc
acatccaacatcagccgccatgattggcgcgaatggatatcgcccgatgtcgactacatt
gccctatgccccaacttgcccgtcccacggtag
DBGET
integrated database retrieval system