Mycobacterium shottsii: MSHO_51490
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Entry
MSHO_51490 CDS
T07303
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
msho
Mycobacterium shottsii
Brite
KEGG Orthology (KO) [BR:
msho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msho03016
]
MSHO_51490
Enzymes [BR:
msho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MSHO_51490
Transfer RNA biogenesis [BR:
msho03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MSHO_51490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BBX59804
UniProt:
A0A7I7LJ50
LinkDB
All DBs
Position
4966518..4967825
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AA seq
435 aa
AA seq
DB search
MCSALSPEGNEPPEGTAPEATPLLSPASGVPELSVTAGQIEAAATLLDRGSGPFAVDAER
ASGFRYSNRAYLIQIRRAGAGTVLIDPVSHGGDPLTVLQPLAEVLAKDEWILHSADQDLP
CLAEVGMRPSALYDTELAGRLAGYDRVNLATMVERLLGMGLVKGHGAADWSKRPLPSDWL
NYAALDVELLIELRSAISGVLAEQGKSDWAAQEFEYLRTFESRWVPATARPDRWRRTSGI
HKVRDRRGLAAVRELWITRDRIAERRDIAPRRILPDSAIIDAALADPKSVDDLVSLPVFG
GRNQRRNATMWLGALDVARKSQHPPEVAEPSNGPPVPARWSRRKPEAAARLEAARAALSE
VSDSVGVPTENLVTPELVRRLCWDWAPVAAAEITSTIDEFLATGQARVWQRELVVPALAA
ALANAAEPETEPGAR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcagccctatctcctgaggggaacgaaccgccggagggcacagcacccgaagcc
actcccctgctgagcccggcgagcggggttccggaactctccgtgaccgccggccagatc
gaggcggccgcgacactcctggaccgcggcagcgggccctttgccgtcgacgccgagcgc
gcatcgggctttcgttactccaatcgggcctatctgatccagatccggcgggccggcgcc
ggaacggtgctgatcgacccggtcagccacggcggtgacccgctgaccgtgctgcaaccg
ctggccgaagtgctggccaaagacgagtggatcctgcactcggccgaccaggacctgccc
tgtctggccgaggttgggatgcgtccgtcggcgttgtacgacaccgaactggcggggcga
ttggccgggtacgaccgggtgaacctggcgaccatggtcgagcggctactcggcatgggc
ctggtcaaaggccacggcgccgccgactggtccaagcgtccgctgccgtcggactggctc
aactacgccgcgttggacgtggagttgctcatcgagctacgctcggcgatctcgggggtg
ctggccgagcaaggtaaatccgactgggccgcgcaagaattcgagtatctgcggacgttc
gaatcacgttgggtgccggccaccgcccggccggaccgctggcggcgaacctcggggatc
cacaaagtgcgtgaccggcgaggtctggccgccgttcgcgagttgtggataaccagagac
cgcatcgccgagcgtcgtgacatcgcgccccgccggattctgccggactcggcgatcatc
gatgccgccctcgccgacccgaagtcggtcgacgacctggtgtcattgccggtgttcggc
gggcgcaaccagcgccgcaacgcgacgatgtggctcggggccctggacgtcgcgcgcaag
agccagcatccgccggaagtggccgaaccctccaatgggccgcccgttccggcgcggtgg
agccgacgcaaacccgaagctgccgcgcgcctggaggccgcccgcgcggcgttgtccgag
gtgtcggattcggtgggagtgccgacggagaacctggtcacgcccgagctggtgcggcgc
ctgtgctgggactgggcaccggtggccgccgccgagataaccagcaccatcgatgaattc
ttggccaccgggcaagcccgggtctggcagcgtgagctggtggtacccgccctggccgcg
gcgctggccaatgccgccgaacccgagaccgaaccgggcgcccgctag
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