Mycobacterium shottsii: MSHO_52000
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Entry
MSHO_52000 CDS
T07303
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
msho
Mycobacterium shottsii
Pathway
msho00300
Lysine biosynthesis
msho00470
D-Amino acid metabolism
msho01100
Metabolic pathways
msho01110
Biosynthesis of secondary metabolites
msho01120
Microbial metabolism in diverse environments
msho01230
Biosynthesis of amino acids
Module
msho_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
msho00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MSHO_52000 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MSHO_52000 (dapF)
Enzymes [BR:
msho01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
MSHO_52000 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
YfdX
Motif
Other DBs
NCBI-ProteinID:
BBX59855
UniProt:
A0A7I7LJ61
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Position
complement(5012710..5013582)
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AA seq
290 aa
AA seq
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MIFAKGHGTQNDFVLLPDVAARLSLTAAQVAALCDRRRGLGADGILRVTTADAAVAAGVL
HRLPDGVSRGDWYMDYRNADGSTAQMCGNGVRVFAHYLRASGLETRDEFVVGSLAGPRPV
TVHHADQTHADVTVDMGKANKLGPGEAVVGGRRLSGVAVDVGNPHLACLDPGLTPEQLAA
LDVGAPVSFDHAQFPEGVNVEVLTAPAAGVVCMRVHERGVGETRSCGTGTVAAAVAALAS
AGQETGTLTVRIPGGDVTVNITDATSLLRGPSVLVASGEISEEWWRDLRR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtgatcttcgccaagggccacggcacccagaacgattttgtgctgttgcctgacgtggcg
gcccggctgtcgctgaccgccgcccaggttgcggcgctctgcgatcgccgccggggtttg
ggcgctgatggcatcctgcgggtcaccaccgcggatgcggccgtggcggccggtgttctg
caccgtctgcccgacggtgtcagtcggggcgactggtacatggactaccgcaacgccgac
gggtcgaccgctcagatgtgtggcaacggcgtgcgagtgttcgcccattacctgcgagcc
agcgggttggagacgcgcgatgagttcgtggtcgggtcactggccggcccgcggccggtt
accgtgcaccacgccgatcagacccacgccgacgtcaccgtcgacatgggcaaggccaac
aagctggggccgggggaggccgtcgttggcggcaggcggttatccggcgtggccgttgac
gtcggcaatccgcacctggcatgccttgatccggggctgacaccggagcagctggcagcg
ttggatgtgggggccccggtgagcttcgatcacgcgcaatttcccgagggcgtcaacgtc
gaggttctcaccgcgccggccgccggcgtggtgtgcatgcgtgttcatgaacgcggcgtt
ggtgaaacccgctcctgcggcaccggcaccgtcgccgccgccgtcgccgcgctggcgagc
gcaggacaggagaccggcacgctgaccgtccgcattcccggcggggatgtcacggtcaac
atcaccgatgcgaccagcctgctgcgcgggccgtcggtgctggtcgccagcggtgagatc
agcgaggaatggtggcgcgatctacggcgttaa
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