Mycobacterium shottsii: MSHO_54550
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Entry
MSHO_54550 CDS
T07303
Symbol
smc
Name
(GenBank) chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
msho
Mycobacterium shottsii
Brite
KEGG Orthology (KO) [BR:
msho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msho03036
]
MSHO_54550 (smc)
Chromosome and associated proteins [BR:
msho03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
MSHO_54550 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BBX60110
UniProt:
A0A7I7LKI5
LinkDB
All DBs
Position
complement(5247963..5251556)
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AA seq
1197 aa
AA seq
DB search
MYLKSLTLKGFKSFAAPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGK
MEDVIFAGTSSRAPLGRAEVTVTIDNSDNALPIEYTEVSITRRMFRDGASEYEINGSSCR
LMDVQELLSDSGIGREMHVIVGQGKLDEILQSRPEDRRAFIEEAAGVLKHRKRKEKALRK
LDAMSANLARLTDLTTELRRQLKPLGRQAEVARRAQTIQADLRDARLRLAADDVVSRRAE
REAIFEAEATMRREHDEAAARLTVAAEELAAHEAALAELTSRAESVQHTWFGLSALAERV
GTTVRIANERAQHLDVEPVTNSDTDPDALEAEAEQVAIAEQQLLVELAEARDRLDAARAE
LADREHRAAEADRAHLAAVRAEADRREGLARLAGQVETMRARVESIDDSVARLSERIEHA
AARAQQTRAEFETVQARVGELDQGEVGLDEQHERTVAALRLAEQRLAELQVAERDAERQV
ASLRARIEALSVGLDRKDGAAWLARNHSDAGLFGSVAQLVKVRSGYEAAVAAVLGSAAEA
LAADSFGAARSAVTALKQADGGRAALVLGDWPGAHDHRPAGVLPSGALWALDLIEVPSRL
RPAMTAMLSGVVVVNDLSEALDLVQAQPQLRAVTLDGDLVGAGWLSGGSDRKPSTLEITS
EIDKARSELAAAEVRVAELGAALSGALTDQTARQDAAEQALAALNESDTAISAMYEQLGR
IGQDARGSEEEWTRLLRQREELEVGRTQTLEEVLELESRLRNAQESQHVRAAEPVDRQQI
AAAAESARAIEVEARLTVRTAEERANAVRGRADSLRRAAAAEREARVRAELARAVRLRSA
AVAAAVAESGRLLAWRLNRVVDTASQLRDELAAERHQRSAAMSAVREETNSLSARVAILT
DSLHRDEVANAQAALRIEQVEQMVLEQFGMAPSDLVAEYGPDVALPPTELEMAEFEQARE
RGEQVVAPAPMPFDRATQQRRAKRAERELTELGRVNPLALEEFAALEERYNFLSTQLEDV
KAARKDLLDVVADVDARILQVFSDAFVDVEREFRTVFSSLFPGGEGRLRLTAPEDMLTTG
IEVEARPPGKKVSRLSLLSGGEKALTAVAMLVAIFRARPSPFYIMDEVEAALDDTNLRRL
IGLFEMLRDRSQLIIITHQKPTMEVADALYGVTMQGDGITAVISQRIRGQQVGAGSA
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
gtgtacctcaagagtctgacgctgaagggcttcaaatccttcgctgcgccgacgactctg
cgcttcgagccgggcatcacggccgtggtcgggcccaacggatccggcaagtccaatgtg
gtggatgccctggcctgggtgatgggtgagcagggcgccaagaccctgcgtggcggaaag
atggaagacgtcattttcgccggtacgtcgtcgcgggcaccgctggggcgcgccgaagtc
acggtcacgatcgacaattccgacaacgccctgccgatcgagtacaccgaggtgtcgatc
accaggcgcatgttccgcgatggcgccagcgagtacgaaatcaacggcagcagttgccgg
ttgatggatgtccaggaactgctgagcgactccggcatcggccgtgagatgcatgtgatc
gtcggtcagggcaagctggacgagatcctgcagtcgcgaccggaggaccgccgcgcattc
atcgaagaagccgcgggtgtgctcaaacatcgcaagcgcaaggaaaaagccttgcgcaaa
ctcgacgcgatgtcggccaacctggcccggctcaccgacctgaccaccgaactgcgtcgc
cagctcaagccgctgggccgacaggccgaggtggcccgccgtgcccagaccattcaggcc
gatctgcgcgatgcgcggctgcggctggccgccgacgatgtggtgagcaggcgcgccgag
cgcgaagccattttcgaagccgaggcgacgatgcgtcgcgagcacgacgaggccgctgcc
cgcctgaccgtggcggccgaagagttggccgcccacgaggcggcgctggccgagctcacg
tccagggcggagtcggttcagcacacctggttcgggttgtcggcattggccgaacgagtg
ggcaccacggtgcgcatcgccaacgagcgtgctcagcatctcgacgtcgagccggtgacc
aacagcgacaccgacccggacgcgttggaagcagaggccgagcaggtcgccatcgccgaa
cagcagctgctggtcgagctggccgaagcccgcgaccggctggatgccgcgcgcgcggag
ttggccgaccgtgagcatcgcgccgccgaggccgaccgcgcgcacttggcggcggtccgc
gccgaggccgaccgccgtgaggggctggcgcggctggccggacaggtggaaaccatgcgg
gcgcgcgtcgaatcgatcgacgacagcgttgcgcggctctccgagcgcatcgaacatgcc
gccgcccgggcccagcagacccgcgcggagttcgagaccgtgcaggcccgcgtcggcgaa
ttggatcagggcgaggtcggtctggacgagcagcacgaacgcacggtcgcggcactgcgg
ctggccgagcagcggctcgccgaactgcaggtcgccgaacgtgacgccgagcgacaggtg
gcgtcgctgcgggcccgcatcgaggcgctgtcggtgggtctggaccgcaaggacggcgcg
gcgtggctggcccgcaatcacagcgatgccgggcttttcgggtcggttgcccagctggtc
aaggtgcgttcgggttacgaggcggcagttgccgcagtgctcgggtcggcggccgaggca
ctggccgccgacagtttcggggcagcccgcagcgcggtcaccgcgctcaagcaagccgac
ggcggccgcgccgcgctggtgctgggtgattggccgggtgcccacgaccaccggccggcc
ggtgtcctgccgtccggggcgctgtgggcgctggatttgatcgaggtgccgtcgcggtta
cgaccagcgatgacggcgatgctctcgggcgttgtcgtggtcaacgatttgtccgaagcg
ctggatctggtgcaggcccaaccgcaactgcgtgcggtcaccctcgacggtgatctggtg
ggtgccggctggttgagcggcggttcggaccgcaaacccagcacgctggagatcacttcg
gagatcgacaaggcccgtagcgagctggccgccgcggaggtgcgggtggccgaactcggc
gcggcgctctcgggtgcgttgaccgatcagaccgcccgccaggatgcggccgaacaggcc
ttggcggcgctcaacgaatccgacaccgccatttcggcgatgtatgagcaactaggccgc
atcggacaggatgcgcgtgggtccgaggaagagtggaccaggctgctgcgacagcgtgag
gaattagaggttgggcgaacgcagaccctcgaagaggttctcgagctggagagccggctg
cgcaacgctcaagagtcccagcacgtccgggctgccgaaccggtcgaccgccagcagata
gcggccgctgccgagagcgcgcgcgccattgaagtggaggccaggctgaccgtgcggacc
gccgaggagcgtgccaacgcggtgcgcgggcgggctgactcgctgcgccgggcggccgcg
gcggaacgtgaagcccgggtgcgcgccgaacttgcgcgggcggttcgattgcgctcggcg
gcggtggccgcggccgtcgcagaatccgggcggctgttggcgtggcggttgaaccgggtg
gtcgatacggcgtcgcagcttcgtgacgagttggcggccgaacggcatcagcgttcagcg
gcgatgtcggcggttcgtgaagaaaccaactcgctgagcgcgcgagtggccatactgact
gattcgctgcaccgtgacgaggtggcaaatgcccaggcggcgttgcgaattgagcaagtc
gaacagatggtgctagagcagttcgggatggcgccatcagatctggtcgccgagtacggc
ccagatgttgcgctgccgcccaccgagctggagatggccgaattcgaacaggcccgcgaa
cgtggcgaacaggtcgtcgcgccggccccgatgccttttgatcgcgccacccagcagcgc
cgcgccaaacgcgccgagcgtgaactgacggagctgggcagggtcaacccgctagccctg
gaagaatttgctgcgctagaggagcgctataacttcctgtccacccagctcgaggacgtc
aaagcggcccgcaaggatttgctggatgtggttgccgacgtcgatgcccgcattctgcag
gtgttcagtgacgccttcgttgacgtggaacgtgagttccggaccgttttcagttcgttg
ttcccgggtggtgagggccggttgcggctcactgcgcccgaggacatgctcaccaccggc
atcgaggtggaggcccgcccgcccggcaagaaggtctcccggctgtcgttgctctccggt
ggtgagaaggcgctgaccgcggtggcgatgctggtggcgatcttccgggcccgtccgtcg
ccgttctacatcatggacgaggtggaggcggccctcgatgacacgaacctgcgccggttg
atcggcctgttcgagatgctgcgggaccgatcgcagctcatcatcatcacgcaccagaag
ccgacaatggaagtcgccgatgcgctctatggggtcaccatgcagggcgatggcattacc
gcggtgatctcgcagcggatccgcggtcagcaggtgggtgcgggttccgcttag
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