Mycobacterium shottsii: MSHO_59440
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Entry
MSHO_59440 CDS
T07303
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msho
Mycobacterium shottsii
Pathway
msho03420
Nucleotide excision repair
msho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSHO_59440
03430 Mismatch repair
MSHO_59440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msho03400
]
MSHO_59440
Enzymes [BR:
msho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSHO_59440
DNA repair and recombination proteins [BR:
msho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSHO_59440
MMR (mismatch excision repair)
Other MMR factors
MSHO_59440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
BBX60599
UniProt:
A0A7I7LMS5
LinkDB
All DBs
Position
complement(5737631..5740936)
Genome browser
AA seq
1101 aa
AA seq
DB search
MNPRYSPDEIASALGIFPPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGY
AEPGQVLGLTFTRKAAGQLLRRVRSRLARLAGTTAGVAVGEAAGAPTVSTYHAFAGSLLR
EHGLLLPIEPDTRLLSETELWQLAFEVVNGYRGELCTQKTPAAFTATVLRLWGQLAEHLV
DTRQLRDTHIELERLVHALPAGPNQRDSGPNQWLLRMLATQTERAELVPLLDALHERMRA
AKVMDFGMQMAAAARLAATCPQVGEELRSRYRVVLLDEYQDTGHSQRIALSALFGGGVDD
GLALTAVGDPIQSIYGWRGASATNLPRFSTDFALSDGAPAPVLELRTSWRNPPRALHLAN
AISAEARRRSVAVHALRSRPDAPAGTVRCALLADVQAERDWIADQLQGHYQRAAADGVSP
PTAAVLVRRNADAAPIADALVARGIPVEVVGLAGLLSIPEVADLVAMLRLVGDPTAGAAA
MRVLTGPRWRLGGSDVAALWRRAVALVGGPQVGASASPGAVAAAAGPDTDTACLADAICD
PGPADWYSPAGYERIGALAAELNALRGHLGHWLPDLVAEVRRVLGLDCDVRAAATASGAW
AGAEHLDAFADVVADYAERAATSAGSALSTKASVDGLLAYLDVAAEVENGLRPAQLTVAR
DRVQVLTVHAAKGLEWQVVAVAHLSAGVFPSTASRSSWLTDPGELPPLLRGDRASAGALG
IPVLDTSAVTNRKQLSDTISAHREQLDQRRVDEERRLLYVGVTRAEDNVLVSGHHWGATG
LKPRGPSDFLCELKDIIERSAAAGDPCGTVDQWDPAPAAGERNPLLDDVVEAVWPTDPLA
TRRGDVERGARLVAEAISADAGVEAPAGGAVVADIEGWTADVDALLAERARAVGPPTRAL
PNQLSVSGLVELARDPVGARQRLVHRLPTRPDPHAQLGNAFHTWVQQFYGAELLFDLGDL
PGAADSDVGQVEDLAPLQEAFAGSHWAARTPIAVEVPFEMPVGDTVVRGRIDAVFEDPDG
GATVVDWKTGEPPRGPEAMRQAAVQLAVYRMAWAALRGCPESSVRTAFHYVRTGVTVIPD
ELPDGMALAELLADSDPPCSC
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgcgctacagcccggatgagatagcaagtgcgctaggaattttcccgcccacc
gacgagcaggccgccgttatcgccgcccctccgggtccgttggttgtcatcgcgggcgcg
ggagcgggcaagaccgagacgatggccgcccgggtggtttggctggtcgccaacggctac
gccgaaccaggccaggtgttgggcttgaccttcacccgcaaggctgccggccaattgctg
cgccgcgtccggtcgcggctggcccgattggcaggtaccaccgcgggtgtcgccgtcggc
gaagccgcgggtgcgcccacggtcagcacttatcacgcatttgccggctcactgctgcgt
gaacacggcttgttgctgcccatcgagcccgacacccggttgctcagcgagacagagctg
tggcagctggcgttcgaggtcgtcaacggatatcgcggagagctgtgcacccagaagacc
ccggcggcgttcaccgccacggtgctgcggctgtggggccagctcgccgagcacctggtt
gacacccggcagcttcgcgatacccacatcgagctggaacgtctggtgcacgccctgccg
gcgggcccaaaccagcgcgatagcggcccgaatcagtggctgttgcggatgctggccacc
cagaccgagcgggccgagctggtgcccttgctcgacgcgttgcatgagcggatgcgcgcc
gccaaggtgatggacttcggaatgcagatggctgccgccgcacggctggcagcgacgtgc
ccgcaggtcggcgaggagctgcgcagccggtaccgcgtcgtgttgctcgacgagtaccag
gacaccggacactcccagcgcatcgcgctgtcggcactgtttggtggcggcgtcgatgac
gggttggcgttgacggcagtcggtgatccgattcagtcgatctacggctggcgtggtgcc
tcggcgacgaacttgccccggttcagcacggatttcgcgctgtccgacggtgccccggca
ccggttctggagctgcggaccagctggcgcaacccgccgcgcgcactgcacctggcaaac
gcgatctcggcggaggcccgccggcggtcggtggccgtacatgcactgcgttcgcgcccg
gatgcgccggccgggacggttcgttgtgcgctacttgccgatgtgcaggccgaacgggac
tggatcgcagaccaattgcagggtcactatcagcgcgcggcggccgacggggtgagcccg
ccgacggcagcggtgctggtgcgccgcaacgccgacgccgcacccatcgccgatgcactg
gttgcgcggggaatcccggttgaggttgtcgggctggccggcctgttgtccattccggag
gtggccgacctggtagcgatgctgcgactggtgggtgacccgacggccggggccgcggcg
atgcgagtgttgaccggtccgcgctggcggttgggcggcagcgacgtcgccgcactttgg
cgacgggcggtcgcgttggtgggcggtcctcaggtgggcgcatcggcctctcccggcgcc
gtcgcggcggcggcgggtccggacaccgatacggcgtgtctggccgatgccatctgcgac
ccgggccccgccgactggtactcgccggcgggctacgagcgcatcggtgcgctggcagcg
gaattgaacgccctgcgtgggcatcttggtcattggctgccggatcttgtcgccgaggtg
cgacgcgtgcttgggctggattgcgatgtccgtgccgcggcgacggcttcgggggcatgg
gccggtgccgagcacctcgatgcgtttgccgacgtggtcgccgactacgccgagcgggcc
gccacctcggctggtagcgccctgtccaccaaggcatcggtggacggtctgctcgcctat
ctcgatgtcgcggcggaggtagagaacgggttacggccggcccagttgacggtggcacgg
gaccgagttcaagtgctcaccgtgcatgccgcgaagggcctggaatggcaggtggtggcg
gtggcacatctatcggcaggtgttttcccgtcgaccgcgtcgcgaagcagttggctcacc
gatccgggcgagttgccgccgctgcttcggggggaccgggcgtcggcgggagcgctgggc
atcccggtgctggatacctcggcggtgaccaaccgaaagcagctgtcggacaccatttcc
gcgcatcgggaacagctggatcagcggcgcgtcgatgaggagcgccggttgctctacgtc
ggcgttacccgggccgaggacaacgtgctggtatcgggtcaccactggggggccaccggg
ctgaagccgcgcggaccatcggacttcttgtgcgaactcaaggacatcatcgagcggtcg
gccgcggccggcgatccctgcgggacggtggatcagtgggatccggcaccggccgctggt
gaacggaacccgctgctggacgacgtcgtcgaagcggtttggccaactgatccgttggcc
acgcgacgcggcgatgtcgagcgtggggccaggttggtcgcggaggcgatctctgccgat
gccggtgtcgaggcccccgctggcggtgccgtggtcgccgatatcgagggctggaccgcc
gacgtcgatgcgctgttggccgagcgggcgcgtgccgtggggccgccgacgcgagcgttg
ccgaaccagttgtcggtgagcgggctcgtcgagctggcccgcgacccggtgggggccagg
caacggttggtgcaccgcttaccgacccggccggatccgcatgcccagctgggcaatgcc
tttcacacatgggtacagcagttctacggcgcggagctgctgttcgacttgggggacctc
ccgggtgctgccgactccgatgtgggccaagtcgaggatctggcgccgttgcaggaggct
ttcgccggatcgcattgggcggcgcgcacgccgatcgccgtcgaggtgccattcgaaatg
ccggtcggcgacaccgtggtgcggggccgcatcgacgcggtattcgaagaccccgatggc
ggcgcaaccgtcgtcgactggaagaccggtgagccgccgcgtgggcccgaagccatgcgg
caagccgctgtgcagctggctgtgtaccggatggcgtgggccgccctgcgcggatgcccc
gaatcgtcggtgcgtaccgcctttcactatgtgcgcaccggagtcaccgtcatccccgat
gagctgcccgatgggatggcgttggctgagctgctcgccgactccgatccgccttgcagt
tgctaa
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