Methanobrevibacter smithii: Msm_0120
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Entry
Msm_0120 CDS
T00539
Name
(GenBank) purine NTPase involved in DNA repair, Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
msi
Methanobrevibacter smithii
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msi03400
]
Msm_0120
DNA repair and recombination proteins [BR:
msi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Msm_0120
Archaeal homologous recombinant proteins
Msm_0120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_27
AAA_29
AAA_15
Rad50_zn_hook
SbcC_Walker_B
ABC_tran
AAA_22
ABC_ATPase
MukB
BLOC1_2
AAA_30
DUF2163
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ABQ86325
UniProt:
A5UJE7
LinkDB
All DBs
Position
complement(115743..118496)
Genome browser
AA seq
917 aa
AA seq
DB search
MIFTKLTLNNFKSYGHEVIKFGDGITVIVGENGAGKSTILEAISFALFKQHTAKKIDDLV
RNGSDENMYVDLEFVSNGKEYKIHREKTKSGLKSTLLKKTTSKGQFIPSCAGDKEVANEI
QSILDIDSDLFLNAIYIRQGEIAELVDKTSSEKKQLIGKLLGLDSLEKAWKNLQPIISNY
EKTQSELKGKLFSSEELKEEYDHKKALLGSLKEKGLDLEKQIEEVKEMKAEKQNEKTNME
REKEIFDNFNNNLDAEKKRLESLENDKRTLQDNLDEIKKAEEQIARLEKFVKKLPLYLDF
EKSVTSIQQLELDKQKIEKDLDSIATQEELLATKKEGYNKFLAADEQIEKLNNQKINLEK
ELATLTQLEKDKKQLLKSIEGNRNEIERFFSVTKDNLYDNGLSQDILTDVDNFTQLEEVT
DNFSEEVSNKVKDLSLEIISKNEEIVKFKQAIETAQKPLDELGDVENKCPVCQSDINPQK
KNELIDSYNNEIKINEKSIEENKENIRLLNKNKDSFEEKYNRLQELSKDIIGYKNKFDNL
EKDLVRLNEIDDGLESKEYTNTKLGELILDISKEKVGREENKEDYDAYIKSKGALDVLSS
KTELQYKLNQVNNEVDVHVKNIKLAIDQDPHLSGDMSTADLQARITDLKNKEEEFNQLKG
FVQNKKALESQLISKKDDIGVSLNQIEILKNKIEASVYDKEKYEKVIYFYEVYERRYDEF
AGELSEIKGQAKELIANVNVLAEKILTNYKFQQEYKNTTDYIDLLNHIRTLYSKNGIQKE
LRNRSRPVIQKYTKDFFDEFNFNYSDLTLDEDYEVTVFGPEGEASMSMVSGGEKIAIALA
LRLGITKAKAKGDLETILLDEPTIHLDSFRRHELINLLKDMTVLPQMIIVTHESQLENAA
DNLVKVEKNNGISKVSN
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgatttttacaaaattaacattaaacaatttcaaatcctatggtcatgaagttattaag
tttggtgatgggattacagttattgtaggggaaaatggtgctggaaaatctactatttta
gaagctattagtttcgcattatttaaacagcatactgctaaaaaaattgatgatctggta
agaaatggcagtgatgaaaatatgtatgttgatttggaatttgtttccaatggtaaagaa
tataaaattcatcgtgaaaaaaccaaatcaggtttgaaatcaacacttcttaaaaaaact
acttctaaaggccaatttatcccatcatgtgctggagataaagaggtagctaatgaaatc
caatctattttggatattgattctgatttgtttttaaatgcaatatacataagacagggg
gaaattgcagaactagttgataaaacctcatctgagaaaaagcagttaatcggaaaatta
ttaggtttggattcccttgaaaaagcatggaaaaacttgcagccaattatcagcaactat
gaaaaaacccagtcagaacttaaaggtaagttattttcatctgaagaattaaaagaggaa
tatgatcataaaaaagcattgttaggcagtcttaaagaaaaaggacttgatttagaaaaa
caaattgaagaagtcaaagagatgaaagctgaaaagcaaaatgaaaaaaccaatatggaa
agggaaaaggaaatctttgataacttcaataacaatttggatgctgagaaaaaaagattg
gagtctcttgaaaatgataaaagaacacttcaagataatttggatgaaataaaaaaagct
gaagagcaaattgcaagattggaaaaatttgttaagaaattgcccctgtatcttgacttt
gaaaagtctgttacaagcattcaacagttagagcttgataaacaaaaaattgaaaaagat
ttggattcaattgcaacacaggaagaacttttagcaactaaaaaagagggatataataaa
tttttagcagctgatgagcagattgaaaaattaaacaatcaaaaaatcaatctggaaaaa
gaattggctactcttacccagcttgaaaaagataaaaagcaacttctcaaatcaattgaa
ggaaatagaaatgaaattgaaaggttcttttctgtaactaaggataatctgtatgataac
ggtttgtctcaggatattctgacagatgttgataatttcactcagttggaagaggttact
gacaactttagtgaagaagtttccaataaagttaaggatttaagtcttgagattatttct
aaaaatgaggaaattgtcaaatttaaacaggctattgaaacagcacaaaaacctttagat
gaattgggagatgttgaaaataaatgtcctgtctgtcagtcggatatcaatcctcaaaag
aaaaatgaattgattgattcttataataatgaaattaagattaatgaaaaatctattgag
gaaaataaggaaaatatccgtcttttaaataaaaataaagatagttttgaagaaaaatac
aacagactccaggaattatctaaagatatcataggatataaaaacaaatttgataattta
gaaaaagatctggttaggcttaatgaaattgatgacggactggaatctaaagagtacacc
aatactaaattaggcgaacttatattggatatctctaaagagaaagttggacgtgaagaa
aataaagaggattatgatgcatacataaaatcaaaaggagctcttgatgttttaagcagt
aaaactgaacttcaatataagttaaatcaggttaataatgaagttgatgtccatgttaaa
aacattaaattagctattgatcaggaccctcatttaagtggggatatgagtactgctgat
ttgcaggcacgtattactgatttaaaaaataaagaagaagaatttaatcagcttaaaggt
tttgttcaaaataaaaaggctcttgaatctcaattaatctctaaaaaagatgatattggt
gtttcattaaatcagattgaaatcctgaaaaataaaatagaagcttctgtttatgataaa
gaaaaatacgaaaaagtaatctacttctatgaagtctatgaaagaagatatgatgaattt
gcaggtgagctttcagaaattaaaggtcaggctaaagaattaatagctaatgttaatgtt
ttggcagaaaaaatattaactaactataaattccagcaggaatacaaaaacactactgat
tatattgatttattaaatcatatcagaacattgtattctaaaaatggtatacaaaaagaa
ttgaggaaccgttcaaggccggtaattcagaaatacactaaagacttctttgatgaattt
aactttaattattctgatttaacattggatgaggactatgaagtaactgtattcggtcct
gaaggtgaagcttcaatgagtatggtaagtggtggtgaaaaaatagctattgctcttgct
ttaagattaggtattactaaggctaaggcaaaaggtgatttggaaactattcttttagac
gagcctacaatacatttagacagctttagaagacatgagctaattaatttgttaaaagat
atgactgttttaccgcaaatgattattgtaactcatgaaagccagcttgaaaatgctgca
gataatttggttaaagtagaaaaaaataatggtatttcaaaagtatctaattag
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