Methanobrevibacter smithii: Msm_0121
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Entry
Msm_0121 CDS
T00539
Name
(GenBank) DNA repair exonuclease (SbcD/Mre11-family), Rad32
KO
K03547
DNA repair protein SbcD/Mre11
Organism
msi
Methanobrevibacter smithii
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msi03400
]
Msm_0121
DNA repair and recombination proteins [BR:
msi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Msm_0121
Archaeal homologous recombinant proteins
Msm_0121
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ABQ86326
UniProt:
A5UJE8
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All DBs
Position
complement(118493..119716)
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AA seq
407 aa
AA seq
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MKFAHLADTHLGYRQFGLLEREKDFYEVFDKIIDKIIEEKVDFVIHSGDLFDSARPSPSA
LLAFQKGLLKLKGAGIPMYAIAGNHDIVNRNGAIPPQVLFKKFGLKLISPINTNYMHDDV
FIAGLPFYPASQNKNLKSKLDELSKKAENHEKSILVLHQGIDKYFNLQYELEIGDIPDNF
DYYALGHIHNYICDDFGNGKLVYPGSTETWNVSELIDLKKNGKGFIVVDLDGPKMNVKRV
AMDIPREFIVKTIDYRNLGAEIDSIKNTIKDFDKRPILNLKINNIDSNLGEIYEFINREL
GDLALMIRPTFNVLDREVDVDAIINDENALRPKELLIDELKEYDSEDVNNLAVELYDLLS
KNKTEESEDLIRQFFNEKYNIIRDDSGEEITENKAEDGQVRFSGAIQ
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgcacatttggcagatactcatttaggttatagacagttcggattgcttgaa
cgggaaaaagacttttatgaagtatttgataaaattatagataaaataatcgaagaaaag
gtcgattttgtaatacatagtggagatttatttgattcagcaagaccgtcaccaagtgct
cttttagcttttcaaaaaggtttgcttaaactgaaaggtgcaggaataccaatgtatgca
attgcaggaaatcatgatattgtaaaccgtaacggagctatacctcctcaagttttattt
aaaaaatttggtttaaagttaataagccctattaatacaaattatatgcatgatgatgtt
tttattgcaggactgcctttttatcctgcttcccaaaacaaaaatcttaaaagcaaatta
gatgaattatctaaaaaagcagaaaatcacgaaaaatctattcttgttttacatcaggga
attgacaaatattttaatctacagtatgaattggaaattggtgatattcccgataatttt
gattattatgcattaggccacattcataattatatctgtgatgattttggtaatggaaaa
ctcgtttatccaggttcaactgaaacctggaatgttagtgagttaatagaccttaaaaag
aatggtaaaggttttattgtagttgatttagacggaccgaaaatgaatgttaaaagagtt
gctatggatattccccgtgaatttattgtaaaaacaattgattatagaaatttaggcgct
gaaatagattccattaaaaatacaataaaagattttgataaacggcctattttaaatctt
aaaattaacaatatagattcaaacctaggtgaaatctatgaattcattaatagggaactt
ggtgatttggcattaatgattagacctacattcaatgtacttgatagggaagtggatgtt
gatgccataattaatgatgaaaatgctttacgtcctaaagagcttttaatcgatgaatta
aaggaatatgacagtgaagacgttaataatttagctgttgaattatatgatttgctttca
aaaaataaaacagaggaatctgaggacttgattaggcagtttttcaatgaaaaatacaat
attatacgtgatgattccggtgaggaaataactgaaaacaaagctgaagacggtcaggta
agatttagtggggctattcaatga
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