KEGG   Methanobrevibacter smithii: Msm_0125
Entry
Msm_0125          CDS       T00539                                 
Name
(GenBank) ribosomal protein L40e
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
msi  Methanobrevibacter smithii
Pathway
msi03010  Ribosome
Brite
KEGG Orthology (KO) [BR:msi00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    Msm_0125
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    Msm_0125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:msi03011]
    Msm_0125
   04121 Ubiquitin system [BR:msi04121]
    Msm_0125
Ribosome [BR:msi03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    Msm_0125
  Archaea
    Msm_0125
Ubiquitin system [BR:msi04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   Msm_0125
SSDB
Motif
Pfam: Ribosomal_L40e Zn_Ribbon_1 DZR DUF6079_6th DZR_2 HVO_0416 Zn_ribbon_RanBP DHHC Zn_ribbon_13
Other DBs
NCBI-ProteinID: ABQ86330
UniProt: A5UJF2
LinkDB
Position
complement(123446..123592)
AA seq 48 aa
MARFEEAENRMFNVKICLKCNARNPAAATTCRKCGYTGLRFKAKEPRG
NT seq 147 nt   +upstreamnt  +downstreamnt
atggcaagatttgaagaagcagaaaacagaatgtttaatgttaaaatctgtttaaaatgt
aatgctcgtaaccctgctgctgcaaccacttgtagaaaatgtggttacacaggtttaagg
ttcaaagcaaaagaaccaagaggataa

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