KEGG   Methanobrevibacter smithii: Msm_0170
Entry
Msm_0170          CDS       T00539                                 
Name
(GenBank) conserved hypothetical protein predicted to be involved in DNA repair Msm_0170
  KO
K19091  CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
msi  Methanobrevibacter smithii
Brite
KEGG Orthology (KO) [BR:msi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:msi02048]
    Msm_0170
Prokaryotic defense system [BR:msi02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    Msm_0170
   Subtype I-D factors
    Msm_0170
SSDB
Motif
Pfam: Cas_Cas6_C Cas6_I-A CRISPR_Cas6
Other DBs
NCBI-ProteinID: ABQ86375
UniProt: A5UJJ7
LinkDB
Position
163006..163734
AA seq 242 aa
MRLEIILKGKNNFKVPFNYNHILSAIIYNKIADLNFANELHSSKSFKFFTFSQIYIPKRR
IVKDGIIAKDGVISFYISSPNDFLIKSLVDGFLEDLEISFQNQKLTIQKIEALKTPEFSS
KSEFKTLAPIIVRTKKEINGELKIWDLAPSDKFFKSLENNLIKKYIKFNNLTKTDKKINI
YSDMNFVKRKRISINKGNATTHHRAYMMDLILEGDLDLIEFAYDVGIGEKNSMGFGMIKL
LE
NT seq 729 nt   +upstreamnt  +downstreamnt
atgagactcgaaattatcttaaaaggaaaaaacaactttaaagttccatttaattacaat
catattttatcagccattatttataataaaatagctgatttgaattttgccaatgaattg
cactcatcaaaatcatttaaattttttactttttctcaaatttatattcctaaaagaaga
atagttaaagatggaataatagctaaagacggagttattagtttttatatatcttcacct
aatgattttttaattaaaagtcttgttgacggatttcttgaagatttagaaataagcttt
caaaaccaaaaattaacaattcaaaaaattgaagcattaaaaacccctgaattttcatct
aaaagtgaatttaaaaccttggcaccaataattgtcagaactaaaaaagaaattaatggt
gaacttaaaatttgggatcttgcaccttcagataagtttttcaaatcattggaaaataat
ttaataaaaaaatatattaaatttaataatttaacaaaaactgataaaaaaatcaatata
tattcagatatgaattttgtaaaaagaaaacgaatttcaataaacaaaggcaatgctaca
actcatcacagagcttatatgatggatcttattttagagggtgacctggacctgattgaa
tttgcttatgatgtcggaataggtgagaaaaattcaatgggctttggaatgattaaatta
ttggaataa

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