Methanobrevibacter smithii: Msm_0176
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Entry
Msm_0176 CDS
T00539
Name
(GenBank) ribonuclease III (dsRNA-specific), Rnc
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
msi
Methanobrevibacter smithii
Pathway
msi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Msm_0176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msi03019
]
Msm_0176
03009 Ribosome biogenesis [BR:
msi03009
]
Msm_0176
03036 Chromosome and associated proteins [BR:
msi03036
]
Msm_0176
Enzymes [BR:
msi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Msm_0176
Messenger RNA biogenesis [BR:
msi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Msm_0176
Ribosome biogenesis [BR:
msi03009
]
Eukaryotic type
90S particles
RNase
Msm_0176
Prokaryotic type
rRNA processing factors
Msm_0176
Chromosome and associated proteins [BR:
msi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Msm_0176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
FKBP26_C
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
ABQ86381
UniProt:
A5UJK3
LinkDB
All DBs
Position
complement(178707..179378)
Genome browser
AA seq
223 aa
AA seq
DB search
MNLLEKFNILPKDRHLYDVAFTHGSYGTKHGLDYTYERLEFLGDSVLNMIVSEYLYKQYP
DYEEGKLTKLRANYVCQTALIYYSHELGLDKHIKIYGDDSKITENEVLSITADVFESFLG
AIFLDQGIEFAKDYISKIIFPYIDAKKVFFFDYKSVIKEYGDAQEVDIEYKIIDECGVPH
NKTFIISILIDGKEMGVGKGKNKKEAEQAASKQAMKKLKIQKY
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaatttattagaaaaatttaacatactcccaaaggacaggcatctatatgatgttgca
tttactcacgggtcttatggaacaaaacatggtttagattatacatatgaaagattggag
tttttaggtgactctgttttgaacatgattgtttcagaatatttatataaacagtatccg
gattatgaagaaggtaaattaactaaactgcgagcaaattatgtttgtcaaacagcatta
atttattattcacatgaactgggtttggataagcatatcaaaatatatggtgatgacagc
aaaataactgaaaatgaggttttgtcaattaccgcagatgtttttgaatcatttttagga
gcaatattcttggatcagggtatagaatttgcaaaggattacatttcaaaaataatattc
ccatacatcgatgcaaaaaaagtgtttttctttgattataaatcagtaataaaagaatac
ggggatgcccaggaagtggatattgaatataaaataattgatgaatgcggtgtgcctcat
aataaaacatttataatctctatattgattgacggaaaggaaatgggtgttggtaaaggt
aaaaacaaaaaagaagctgaacaggctgcttcaaaacaggctatgaaaaaactgaaaata
cagaaatattag
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