Methanobrevibacter smithii: Msm_0202
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Entry
Msm_0202 CDS
T00539
Name
(GenBank) translation initiation factor aIF-2, InfB
KO
K03243
translation initiation factor 5B
Organism
msi
Methanobrevibacter smithii
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
msi03012
]
Msm_0202
Translation factors [BR:
msi03012
]
Eukaryotic type
Initiation factors
eIF-5
Msm_0202
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D4
IF-2
GTP_EFTU_D2
MMR_HSR1
ATP_bind_1
Dynamin_N
MerR_2
Motif
Other DBs
NCBI-ProteinID:
ABQ86407
UniProt:
A5UJM9
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Position
complement(193349..195139)
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AA seq
596 aa
AA seq
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MKIRSPIVSVLGHVDHGKTTLLDYIRGSTIAAKEAGGITQHIGATEIPNDTIENICGDFI
SKLAIKDLIPGLFFIDTPGHAAFTSLRKRGGALADLAVLILDVNDGFKPQTYEALNILKM
YKTPFIVVANKIDRLFGWEVHEGASFRETFSNQAKSVQQDLDNKIYEIVGELHKEGFQSE
RFDRVSNFASQISIIPISAKTGEGVIEVLAMLLGLAQEYLTEQLEIDENAPAKGTVLEIK
EETGLGVTLDAIIYDGVLRTNDEIALMLSSEDVLVTKIRSILRPLPLEEMRDSKKKFRKL
DEVVAAAGIKVAAPHLDDVVSGSPLRVLSEDTDVEQEILNEIDNITIDTEDEGILVKADT
IGSLEAVVKLLREMDIPIRAADIGDVNRRDIINSSIAYDENELHGAIIAFNVDVHPNSEE
DLNNSEVKLFSGDVIYQILEEYEEWVKQKQEDKKKSFYDAIIKPAKFVSLPKLVFRQSKP
AIIGIESLSGTLKQGQQLINKDGHVVGSIASMEDKGETLPDISRGQRVAMAIKDAIVGKD
FEEGDELYVDIPEKHYKYIEREFKDKLTEDEFETLYEFLEIKRKQDSDWGSFGLFE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcagatccccaattgtatcagttttaggacatgtagaccacggtaagaccact
ttattggattatattagaggaagtactattgcagctaaggaagctggaggtattactcag
catattggtgctactgagattcctaatgataccattgaaaatatctgtggagatttcata
tccaaattagctattaaagatttaattcctggtttgtttttcattgatactcctggacat
gccgcatttactagtttaagaaaacgtggtggtgcattagctgatttggctgtattgatt
ttagatgttaatgacggatttaagccacagacttatgaagcattaaacattcttaaaatg
tataaaactccatttattgttgtagctaataaaatcgataggctttttggttgggaagtt
catgaaggtgcctcttttagggaaacattttccaatcaggctaaaagtgttcagcaggat
ttggacaataagatttatgaaattgtcggtgaacttcacaaggaaggattccagtctgaa
agatttgacagagtaagcaattttgcttcccagattagtattattccgattagtgctaaa
actggtgaaggagttatagaagttttagctatgcttttagggcttgctcaagaatattta
actgaacaacttgaaatcgatgaaaatgctccagctaaaggtacagttttagaaattaag
gaagaaactggtttgggagttactcttgatgctattatttatgatggtgttttaagaacc
aatgatgaaatagctttaatgttatcttcagaagatgtattggtaactaaaattagatct
attttaagacctcttcctcttgaggaaatgagggattctaaaaagaaatttagaaaatta
gatgaagttgttgcagcggcaggtattaaagtagctgcacctcatttagatgatgttgtt
tcaggttctcctcttagagttttaagtgaagatactgatgttgaacaggagattttaaat
gaaattgacaacattactattgatacagaagatgaaggtattttagttaaagcagatact
attggttcactggaagctgttgttaagctattaagggaaatggatattccaattcgtgca
gctgatatcggtgatgtaaatcgtagggatattattaattcttcaattgcttatgatgaa
aatgaacttcacggagcaattattgcttttaatgtggatgttcatccaaattctgaagaa
gatcttaataattctgaagtcaagctcttttcaggagatgtaatttatcagattcttgaa
gagtatgaggaatgggtcaagcaaaagcaagaagataagaaaaagtcattttatgatgct
ataattaaacctgcaaaatttgtttcacttccaaaattagtgttccgtcaaagtaaacct
gctattatcggtattgaatctttaagcggaactcttaaacaaggtcaacaattgattaat
aaagatgggcatgttgttggttcaatagctagtatggaagataagggtgaaacattacct
gatatttccagaggtcaaagggtagctatggctattaaagatgctatagttggaaaagac
tttgaagagggagacgagttatatgttgatattcctgaaaaacattacaaatacattgaa
agggaatttaaggataaattgactgaagatgaatttgaaaccttatatgagtttttggaa
attaaacgtaagcaggattctgattggggaagttttggtctttttgaataa
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