KEGG   Methanobrevibacter smithii: Msm_0409
Entry
Msm_0409          CDS       T00539                                 
Name
(GenBank) C4-type Zinc-finger protein
  KO
K06874  zinc finger protein ZPR1
Organism
msi  Methanobrevibacter smithii
Brite
KEGG Orthology (KO) [BR:msi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msi03041]
    Msm_0409
Spliceosome [BR:msi03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    Msm_0409
SSDB
Motif
Pfam: jr-ZPR1 Zn_ribbon_ZPR1 Pim CPxCG_zf
Other DBs
NCBI-ProteinID: ABQ86614
UniProt: A5UK86
LinkDB
Position
390202..390759
AA seq 185 aa
MSIKCPACNTENTAKSIMKEIEIPHFGKVLETTIICESCGFKHSDIIALEQNDPAKYILK
INKDNLSTRIVRSQSATVSIPEIGVKVEPGPKSEGYVTNVEGVITRFEDAVKQALHLFND
NTSQKNAQLVLNDLKSIVNGEKTATLIIEDPFGQSNVVSDDVEILDIPEEELKLLKTGFS
IIEDN
NT seq 558 nt   +upstreamnt  +downstreamnt
atgagtattaaatgtcctgcatgtaacactgaaaacacagccaaatccataatgaaagaa
attgaaataccgcattttggaaaggttttagaaacaactatcatttgtgaatcctgcgga
tttaaacacagcgacattatagcacttgaacagaatgaccctgcaaaatatattttaaaa
ataaataaagataatttatccaccagaattgtcagatcacagtcagcaactgtgtccatt
ccagaaattggtgttaaagtggaaccaggtccaaaatcagaaggatatgtaactaatgtt
gaaggtgtaatcacccgatttgaagatgcagtaaaacaggcacttcatttatttaatgac
aatacttctcaaaaaaatgcacagctagttttaaatgatttgaaaagtatagtaaatgga
gaaaaaacagctactttaatcattgaagatccattcggtcaaagtaatgttgtaagtgat
gatgttgaaatattagatattcctgaagaggaattaaaattattaaaaacaggtttcagt
attattgaagataattaa

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