Methanobrevibacter smithii: Msm_0488
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Entry
Msm_0488 CDS
T00539
Name
(GenBank) carbamoylphosphate synthase, large subunit, CarB
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
msi
Methanobrevibacter smithii
Pathway
msi00220
Arginine biosynthesis
msi00240
Pyrimidine metabolism
msi00250
Alanine, aspartate and glutamate metabolism
msi01100
Metabolic pathways
msi01110
Biosynthesis of secondary metabolites
msi01240
Biosynthesis of cofactors
Module
msi_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Msm_0488
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Msm_0488
00220 Arginine biosynthesis
Msm_0488
Enzymes [BR:
msi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Msm_0488
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
Dala_Dala_lig_C
MGS
ATP-grasp
ATPgrasp_Ter
GARS_A
ATP-grasp_3
Jag_N
Motif
Other DBs
NCBI-ProteinID:
ABQ86693
UniProt:
A5UKG5
LinkDB
All DBs
Position
complement(460570..463746)
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AA seq
1058 aa
AA seq
DB search
MPIDKDIKKVLIIGSGPIQIGQAAEFDYSGSQACKSLREEGIETVLVNSNPATIQTDMDM
ADTVYTEPLTPEIVSEIIKKENVDAILPTMGGQTGLNIATGLGDLGLLDGIKVLGSDIQT
IKDVEDRDLFGHFMDKLNEPIPKCHAVESVEEAIEAVKDIGYPVIVRPAFTLGGTGGGVA
YNEEELIEIATHGLDMSFINQVLIDESVLGWKEFEYEVMRDKEDTCIIVCNMENIDPMGI
HTGESVVVAPAQNLNDRDSQALRDASIKIIRALGIQGGCNIQFAVNPETGEYKVIEVNPR
VSRSSALASKATGYPIAKISSKIALGMTLDEIKNDITKETPASFEPAIDYVVVKIPRWPF
DKFRGINREIGVQMKATGEVMAIGRTFEEAIQKAIRSLDMGHDGFEYVEYTEDDLANPTD
ERLFQLYSAIKDGMDLDKIQKLTNIDKFFLYKIRNIVNFENEVTEEKLNDADFLRKAKQM
GCSNKRLAALSNQTEEYIRNLLNRFNIKQSYKMVDTCAAEFEAKTPYYYSTYDSGNELKS
SNKKKIVILGAGPIRIGQGIEFDYCCVHSSLALKDEGIETILINNNPETVSTDYDISDKL
FFEPITFEDVMGIIDQEKPDGVIVQFGGQTSINLAVPLANAGVKILGTPYESIDGVEDRE
LFAKLLNKLHIHQAPYGTANSFEEAREIAERITFPVLVRPSYVIGGRAMEIVYDNNELEK
YMKEAVKVSPEHPILVDKFLEDAIELDVDVLCDGEEVFIAGIMEHIEEAGVHSGDSACVI
PPQTIPEHILNTIREYSTKLALELDVKGLMNIQYAVKLDEEMVYIIEANPRASRTVPFVS
KAIGVPLAKVATWIMTGAKLKDFNLTKEIKIDHVAVKESVFPFLKLPESDTVLGPEMKST
GESIGVDENFGMAFYKSQLAAGMDLPKEGKIFISVKEQDKKKIRPIAEKAANLGFELAAT
SGTADAAKGVDIEKIKKVSQGSPNIRDAILNKEIDLIINTSEGKQSAQDGYIIRRLAIEL
GIPYVTTLSGARAALNAIEAVQNNEITVKSLNEHIDGE
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgcctattgataaggatattaaaaaagtattaataatcggttctggacctattcaaatt
ggtcaagcagcagaatttgattattctggttcacaagcatgtaaatcactaagagaagag
ggaattgaaactgtccttgttaacagtaatcctgctactattcaaactgatatggatatg
gcagatactgtttataccgaaccattaactcctgaaattgtctcagaaattattaaaaaa
gaaaatgtcgatgcaattttaccgactatgggtggacaaacaggattaaatatagctaca
ggacttggagatttaggtttacttgacggaattaaagttttaggttctgatattcagaca
attaaagatgtggaagaccgtgatttgttcggtcatttcatggataaacttaacgaacct
attccaaaatgtcatgctgtagaaagtgttgaagaagctatagaagcagtaaaagacatt
ggttatccagtaattgtaagacctgcatttacacttggaggaaccggtggtggagtagct
tacaatgaagaagaattaattgaaatagctactcatggattggatatgagtttcattaac
caggttcttattgacgaatctgttttaggttggaaagaattcgaatatgaagtaatgagg
gataaagaagacacttgtatcattgtatgtaacatggaaaacatagaccctatgggaatc
cacactggtgaaagtgttgttgtagctcctgctcaaaatttaaatgatagggattcacag
gcattaagagatgcttccattaaaattatcagagctttaggtattcagggaggatgtaat
attcaatttgcagttaatccggaaaccggagaatacaaggtaattgaagtaaatccaagg
gtaagtagaagtagtgcacttgcatctaaagcaacaggttatcctatagctaaaatttct
tctaaaatagctttgggaatgactttagatgaaattaaaaatgatattactaaagaaaca
cctgcttcctttgaaccggctattgattatgtagttgtaaaaatcccaagatggccattt
gataaattcagaggaatcaaccgtgaaataggagttcaaatgaaagctaccggtgaagta
atggcaatcggtagaacatttgaagaagcaattcaaaaagctatcagatcacttgatatg
ggtcatgacggatttgaatatgttgaatacactgaagatgatttggccaatccgactgat
gagcgattattccagttatattcagccattaaagacggaatggatttggataagattcag
aaattaaccaatattgacaaatttttcctatacaaaatcagaaacattgttaattttgaa
aatgaagttacagaagaaaaattaaacgatgctgacttcctgagaaaagctaaacagatg
ggatgttcaaacaaaagattagccgccctatctaatcagactgaagaatacattagaaac
ttacttaacagattcaatataaaacagtcctataaaatggttgatacctgtgctgcagaa
tttgaagctaaaacaccatattattacagtacatatgattcaggtaacgagctcaaatca
tccaataaaaagaaaatcgttattttaggtgcgggtcctatcagaataggtcagggtatt
gagtttgattactgttgtgtacattcctcacttgctctaaaagatgagggaattgaaact
attttaatcaacaacaatccggaaactgtaagtactgattatgatatttctgataaactg
ttctttgaacctatcacttttgaagatgtgatgggtattattgatcaggaaaaacctgat
ggagttattgttcaatttggtggtcaaacttcaattaatttggcagtaccattagctaat
gctggagttaaaatattgggaactccatatgaaagtattgatggtgttgaagacagggaa
ttatttgcaaaattattaaataaattgcatattcatcaggcaccatatggaacagctaat
tcctttgaagaagctcgtgaaattgcagagagaattactttccctgttttagtacgtccg
tcatatgttattggtggaagggctatggaaattgtttatgacaataatgagcttgaaaaa
tatatgaaagaagctgtaaaagtctcacctgaacatccgattttagtagacaagttcctt
gaagatgctattgaattggatgtggatgtattgtgtgacggtgaggaagtatttatagca
ggaattatggaacatattgaggaagcgggtgttcactccggagattctgcttgtgtaatt
ccaccgcaaactattcctgaacacattctcaacactattcgtgaatacagtactaaatta
gctttggaattggatgttaaaggtttaatgaatattcagtatgcagttaaacttgatgag
gaaatggtttacattattgaagctaatcctcgtgcaagtaggacagttccatttgtaagt
aaagctattggagtgccattagctaaagtagctacatggattatgactggagctaaatta
aaagactttaatttaactaaagaaataaaaatagatcatgttgctgtaaaagaatctgtt
ttcccattcttaaaacttccggaatccgatacagtacttggacctgaaatgaaatccact
ggtgaaagtattggtgtagatgaaaactttggaatggcattttacaaatcccagcttgct
gcaggtatggatttaccaaaagaaggtaaaatctttatcagcgtaaaagaacaggataaa
aagaaaatccgtccaattgctgaaaaagcagctaatttaggttttgaacttgcagcaact
agcggaactgctgatgcggcaaagggtgttgacattgaaaaaattaaaaaagtatctcaa
ggatctccaaacatcagggatgcaattttaaacaaggaaattgatctgattatcaacact
tcagaaggtaaacagtctgctcaggacggatatataatcagacgtttagctattgaactt
ggtataccttatgttactaccttgtctggagctagagctgctttaaatgctattgaagct
gttcaaaataatgaaattacagtaaaatctttaaatgaacatattgatggagaataa
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