Methanobrevibacter smithii: Msm_0607
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Entry
Msm_0607 CDS
T00539
Name
(GenBank) predicted ATPase, RNase L inhibitor family
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
msi
Methanobrevibacter smithii
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msi03009
]
Msm_0607
Ribosome biogenesis [BR:
msi03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
Msm_0607
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
Fer4_RLI
Fer4
AAA_21
RsgA_GTPase
Rad17
nSTAND3
AAA_24
Fer4_6
Fer4_21
Fer4_7
Fer4_10
Fer4_2
AAA_23
Fer4_9
AAA_29
MukB
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
ABQ86812
UniProt:
A5UKT4
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All DBs
Position
577478..579256
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AA seq
592 aa
AA seq
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MSRISILDKDKCQPKKCNFVCIDYCPGVRMDEDTIIIDEDTNKPLISEELCEGCGICTNR
CPFDAISIINLPEAIGEPIHRFGQNQFELFGLPSLTEGSVLGLLGPNGIGKSTIMNILSG
TLIPNLGDYENPQDNWDKVIEHYKGSALQNYFTKLAAGEIKAVLKPQMVDQLPKVVKGKV
SDLLTNVDERGKLDYVCDELDLHNVLDREMKNLSGGELQRVAIAATVLREGDFYYFDEPT
SWLDVSQRLNAVKVIRSLAQDGKSVLVIEHDLATLDALSDNIHVLFGEPGGYGVVSGRKG
VRIGINAYINGFLAEENVRIRRNPIEFTIRPPTPEDEGESLSSYSDLSKDYDGFKLTADA
GEIFHDEIVTAFGSNGIGKTTFAKMLAGVEEPTSGEVDTEVTIAYKPQYIVSDFEGTVSD
FLYMNAPSFGSNIFKSEIMEPFKLEDMLEKEVKKLSGGELQRLAIAATLSKDAEIYLFDE
PTAFLDVEQRLIAARVIRKMVESRNAASLIVDHDIVFIDYISDRAMVFNGTPGLEGHASK
PTDLRTSMNEFLGNLNITFRRDKETKRPRVNKLDSYLDREQKEKGEYYYLSD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtatttctatattagacaaagacaaatgtcaacctaagaaatgtaatttcgtt
tgtattgattactgcccaggagtcagaatggatgaagacacaatcatcattgatgaagac
actaacaaaccattgatttctgaagaattatgtgaaggatgcggtatttgtacaaacaga
tgtccatttgatgctatttcaattattaacttacctgaagctataggagaaccaattcac
agattcggacaaaaccagtttgaactatttggacttcctagtttaactgaaggtagtgtt
ttaggtttgctcggtccaaatggaatcggtaaatcaacaataatgaacatactgtccgga
actttaattccaaacttaggagattatgaaaaccctcaagataattgggacaaagtaatt
gaacattataaaggttcagctcttcaaaactactttacaaaattagccgctggagaaata
aaagctgttttaaaacctcaaatggtggatcagcttccaaaagttgtaaaaggaaaagta
agtgatttgcttacaaatgttgatgaaagaggaaaattggattatgtctgtgatgaatta
gaccttcataatgttttagaccgtgaaatgaaaaacttaagtggtggggaactccaaaga
gtagctatagctgcaactgtcttaagagaaggagacttctattactttgacgaacctaca
tcctggctggatgtttcacaaaggttaaatgcagtaaaagtaatccgttcacttgctcaa
gacggcaaaagtgttttagttattgaacacgatttggctactttagatgcattgtccgac
aatatccatgttttatttggtgaacctggaggatatggtgttgtatcaggtagaaaaggt
gttagaattggaatcaatgcatacatcaacggatttttagctgaagaaaatgtaaggata
agaagaaatcctattgaatttacaatcagaccaccgactcctgaagatgaaggagaatca
ctgtccagctattctgatttaagtaaggattatgacggattcaaattaactgcagatgct
ggagaaatattccacgacgaaatcgtaactgcatttggttcaaatggtataggaaaaacc
actttcgccaaaatgctggcaggagtagaagaaccgacaagcggagaagtagacacagaa
gttacaatagcttacaaaccacaatatatagtttctgattttgaaggaactgttagtgac
ttcctgtacatgaatgctccaagtttcggaagcaacatctttaaaagcgagattatggaa
ccttttaaattagaagatatgcttgaaaaagaagttaaaaagttaagtggtggggaactc
caaagacttgcaatagctgcaacactttcaaaagatgctgaaatttatcttttcgatgaa
cctactgcatttttagatgtggaacaaagattaatagctgcaagagttattagaaaaatg
gttgaaagcagaaatgcagcatcacttattgtagaccacgatattgtatttatcgattat
atctcagacagggcaatggtatttaacggtactcccggtttagaaggtcatgcatccaaa
ccgacagatttaagaacttccatgaacgaatttttaggaaatctaaatattactttcaga
agagataaagaaacaaaaagaccaagagttaataaattagacagctatcttgatcgtgaa
caaaaagaaaaaggagaatattattacttatcagattaa
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