Methanobrevibacter smithii: Msm_0640
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Entry
Msm_0640 CDS
T00539
Name
(GenBank) cell division protein (RNA-binding), PelA
KO
K06965
protein pelota
Organism
msi
Methanobrevibacter smithii
Pathway
msi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Msm_0640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msi03019
]
Msm_0640
Messenger RNA biogenesis [BR:
msi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
Msm_0640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
Motif
Other DBs
NCBI-ProteinID:
ABQ86845
UniProt:
A5UKW7
LinkDB
All DBs
Position
complement(618552..619613)
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AA seq
353 aa
AA seq
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MKIVKQDKKEGIVTLVPETLDDLWHLSHIVEVGDSVSSKTTRRIQDNTGDKLRSDRGVKK
TFTLRIDVENITFHIFTGKLRLTGVITKGPEDLIPLGSHHTVEVKLNTPITIKKEKWANW
ALKRLNQAIEASKKLAAIIVLLEDDTATLGLMRQFGIEYYGPIKGSVSGKRIVDKNRSKA
IAQFYEKVIESVNKFHDIQNIVVAGPGFVKNDFYDYIKNKHKDLADKAIIESTGSGGRVG
IHEVLKKGTVEKLTVENRVASEMVAINNLLEEIGKNSSKVAYGEKETVKAINLGAVKQLL
VLDSAVAINDMGNLMDMVENMNGEVMVISSQHEGGEQLKGLGSMAAILRYEIA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgtaaaacaggataaaaaagaaggaattgtgacattagttccagaaactctt
gatgatttgtggcatttgtctcatattgtagaggttggagacagtgtatcttccaaaact
accagacgtattcaggacaatactggagataaattaagaagtgacagaggggtcaaaaaa
acatttactttaagaattgatgttgaaaatattacttttcatatttttaccggaaaatta
aggcttaccggggtaattacaaaaggtccggaagatcttattcctttaggttcacaccat
acagttgaagttaaacttaacactccaataaccattaaaaaggaaaagtgggcaaactgg
gcactaaaaagactcaatcaggctattgaagcatctaaaaaattagctgcaatcattgtt
cttttggaggatgacacagctactttaggtttgatgagacagttcggtattgaatattat
ggtccgattaaaggttctgtttcaggaaagcgcattgtggataaaaacagatcaaaggca
atcgcccagttttatgaaaaggtcattgaatcagtcaataaattccatgatattcaaaat
attgtagttgcaggaccgggctttgttaaaaatgatttttatgattatattaaaaataag
cataaggatttagctgataaggcaattattgaaagtacaggttctggaggaagggttgga
attcatgaagttcttaaaaaagggactgttgagaaactaactgtggaaaatagggtagcc
agtgaaatggttgccatcaacaatcttcttgaagaaataggtaagaattcatctaaagtg
gcttatggtgaaaaagaaactgttaaagcaataaaccttggtgcagttaaacagttattg
gtactggattctgcagtagctattaatgatatgggaaatttaatggacatggttgaaaat
atgaatggtgaagtaatggttatcagtagccagcatgaaggtggggagcaacttaaaggt
ttgggtagtatggcagctattttaagatatgaaatagcttaa
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