Methanobrevibacter smithii: Msm_0732
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Entry
Msm_0732 CDS
T00539
Name
(GenBank) tRNA pseudouridine synthase B, TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
msi
Methanobrevibacter smithii
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msi03016
]
Msm_0732
Enzymes [BR:
msi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Msm_0732
Transfer RNA biogenesis [BR:
msi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Msm_0732
Prokaryotic type
Msm_0732
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
GnsAB_toxin
Motif
Other DBs
NCBI-ProteinID:
ABQ86937
UniProt:
A5UL59
LinkDB
All DBs
Position
complement(705911..706873)
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AA seq
320 aa
AA seq
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MKDFLTKSKSFTNPEYGCAPEEREISDYISHGVINLDKPSGPTSHEIDSWVKRILNLEKS
GHGGTLDPKVTGVLPVGLGDATRAIQLLLTAPKEYVCVMTFHHEVDEDKIREVFNEFTGK
IFQLPPVKSAVKRELRSRNVYYSTIYEINGRDVLFRIGCEAGTYVRTYCHNIGEAIGVGA
HMAELRRTQVGSFTEDNHLSTLQDVTDAYHFYKEDGDESFLRKAIMPMERAADYLPKVVI
KDSAVDAICHGANLASGGIAYLSDNIQKNSIVAIETLKGELVASGNSLFSSDEILDLESG
FAVNVSKVFMKTDIYPKMWK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaagactttcttacaaaatccaaaagttttacaaatcctgaatatggatgtgctcct
gaagaacgtgaaatttcagattatatttctcatggtgttattaatttagataaaccgtca
ggaccaacttctcatgaaattgattcatgggtaaaacgtattttaaatttggagaaatca
ggacacggcggaactttggatccaaaagttacaggtgttttgcctgtaggacttggagat
gcaacaagagctattcaacttcttttaacagctcctaaagaatatgtttgtgtaatgact
tttcatcatgaagttgatgaggataaaattcgtgaagtgtttaatgagtttacaggtaaa
attttccaacttcctccggttaaatcagcagttaaacgtgaattaagatcacgtaatgtt
tattattccactatctatgaaattaatggtagggatgtcttatttagaataggctgtgaa
gctggaacttacgttagaacttactgccataatataggtgaagcaattggtgttggtgca
cacatggcagagcttagaagaacacaggtaggttcatttacagaggataaccatttatcc
actcttcaggatgttactgatgcatatcatttctacaaagaagatggtgacgagtcattt
ttaagaaaagctattatgccgatggagcgagctgcagattacctgccaaaagtagttatt
aaagattctgcagttgatgcaatatgtcacggtgccaacttggccagtgggggaatagct
tatctgtctgacaatattcaaaaaaattccatagtagctattgaaacacttaaaggtgaa
ctggttgcttcaggtaattctttatttagcagtgatgagattttagatttggaatcagga
tttgctgttaatgtttctaaagtttttatgaaaacagatatttatcctaaaatgtggaaa
taa
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