Methanobrevibacter smithii: Msm_0773
Help
Entry
Msm_0773 CDS
T00539
Name
(GenBank) multidrug ABC transporter, ATPase component
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
msi
Methanobrevibacter smithii
Pathway
msi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Msm_0773
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msi02000
]
Msm_0773
Transporters [BR:
msi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Msm_0773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
ABC_ATPase
AAA_21
AAA_29
DEAD
AAA_30
TEADIR3
Motif
Other DBs
NCBI-ProteinID:
ABQ86978
UniProt:
A5ULA0
LinkDB
All DBs
Position
complement(732142..733887)
Genome browser
AA seq
581 aa
AA seq
DB search
MLSKFFTKRFGLTKEGSDNLIKGIFYTALLNISFMFPVGLYALLIYLWVEQLTVGEIIDP
NLGIFILLILIILGIIFAFAWKQYHFVFNTTYVESGNRRINLGENLRKLPLSFFENRDLA
DLTATIMNDCTDLEHVFSHAVPQLMGSIISLCIVSVGMFLFDWRLAIALLWVVPVAFIFL
FISKRLIYIGGDRIMADLLNCGDAVQECIESIGDLKSYNCEEEYYGKIGSLTSTIEKSRI
NAELMATSGVIVGKVVLNLGIVSVILLGSYLIINSQISIFTFLIFLIASATVYSPLENGL
IFLAEIFMMDNKITRAQEIESLVVEGGLADYSLDSYDVEFENVSFNYDDLKDVLTDISFT
AKQGEVTALVGPSGGGKSTVSKLAARFWDPVSGTVSLGGQDLSKLDSEKLLENFSIVFQD
VILFNNSILENIRVGRKDATDEEVIEAARLAECEEFVFKLPNGYDTVIGENGELLSGGQR
QRISIARALLKDANVILLDEATSFLDVENESKIQKALSELIKNKTVIIIAHRMRTIANAD
RIVVLDDGKIVEQGMPEELIADNGLFKKMVDLQSLSGEWQI
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgttatctaagttttttactaaaagatttggacttacaaaagagggttctgacaacttg
attaaaggaattttctatactgcacttttgaacatatcatttatgtttcccgttggttta
tatgcattacttatttatctgtgggtggagcaattaacagtgggtgaaataattgatcca
aatcttggaatatttattttattgatactgattattttaggaattatttttgcctttgca
tggaagcagtatcactttgtattcaatacaacatatgttgaaagtggaaacagaagaatc
aaccttggtgagaatttaaggaaacttccattatccttttttgaaaatagggatttggct
gatctgactgcaacaataatgaatgattgtactgatttggagcatgttttctcacatgcg
gttccgcaattgatgggttcaatcatttcactatgtattgtttcagtgggaatgtttcta
tttgactggagattggctattgcgcttttatgggtagtccctgttgcatttatattctta
tttatctccaaaagacttatttatattggtggggatagaataatggctgatttgcttaat
tgtggagatgctgtgcaagaatgcattgaatcaattggggatttgaaatcctacaattgt
gaagaggaatattatggaaaaattggcagtttaacttcaacaattgaaaaatcaagaatt
aatgctgaattaatggctacttcgggagtaatagttggaaaagttgtattaaatttagga
attgtatctgtaatccttttaggttcatatctaataataaattcgcaaatatcaattttt
acctttttaatattcttgatagcatctgcaacagtttattctccactggaaaacggattg
atatttttggcagaaatatttatgatggacaataaaattacaagggctcaggaaattgaa
agtcttgtagttgaaggaggtttggctgattattctttggacagttatgatgtcgaattt
gaaaatgtcagttttaattacgatgatttgaaggatgttttaactgatatttcatttact
gcaaagcagggtgaagttacagctcttgtagggccgtctggcggaggtaaaagtacagtt
tcaaagcttgccgcaagattttgggatcctgtatcaggtacagtatcacttggaggtcag
gatttatcaaaattggactcagaaaagcttctggaaaacttttcaattgtttttcaggat
gtaatattgttcaacaattcaattttggaaaatattcgtgttggaagaaaagatgcaact
gatgaagaagtgattgaagctgcccgtcttgcagaatgtgaagagtttgtctttaaactt
ccaaatggatatgatactgtaattggtgaaaatggtgagttgctctcaggcggtcaaaga
caaagaatttcaattgcaagggcacttctaaaagatgcaaatgtaattttattggatgaa
gcaacttcatttttagatgttgaaaatgaatctaaaatccaaaaggcattgtctgagttg
attaaaaacaagacagtcatcatcattgctcataggatgagaacaatagctaatgctgat
agaattgttgttttagatgacggcaaaattgtggagcagggaatgcctgaagaactaatt
gcagataatggtttgtttaaaaagatggttgatttacagagcttaagtggagaatggcaa
atttag
DBGET
integrated database retrieval system
