Methanobrevibacter smithii: Msm_0843
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Entry
Msm_0843 CDS
T00539
Name
(GenBank) 2-deoxyribose-5-phosphate aldolase (DERA), DeoC
KO
K01619
deoxyribose-phosphate aldolase [EC:
4.1.2.4
]
Organism
msi
Methanobrevibacter smithii
Pathway
msi00030
Pentose phosphate pathway
msi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
Msm_0843
Enzymes [BR:
msi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.4 deoxyribose-phosphate aldolase
Msm_0843
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoC
DUF7698
ComA
VP9
Pkip-1
HypD
Motif
Other DBs
NCBI-ProteinID:
ABQ87048
UniProt:
A5ULH0
LinkDB
All DBs
Position
800389..801111
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AA seq
240 aa
AA seq
DB search
MYKIKNSKELASLINCINLNNMISEEEMEEYLDKLGELNFNSITISPTYVSLAKEKLADS
TTKISTVVGFPLGFETTEGKVAQAAKALEDGADEIEAVINLNHLKDHKYNLIHEELSQLR
ELLGDKTLKVIVEMQAIEDSEKASIAKVLEENKVDFIKTSTGFIAPDNIYSKVNDINIIQ
KYAPQLKIEIYGGVDTYKLANQLLTGGADLIGSDNGYEIVDKYRTLRENTQVTPKPIRFD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaataaaaaactcaaaagagttagcaagccttatcaattgtataaacttaaat
aacatgataagtgaagaagaaatggaagaatatttagataaattgggagaactaaacttt
aattccattacaataagtccgacatatgtatcattagctaaagaaaaattagctgacagt
actacaaaaataagtactgttgttggatttcctttaggttttgaaacaacagaaggtaaa
gtagcacaagcagctaaagctcttgaagacggagcagatgaaattgaagcagtaatcaat
ttaaaccacctaaaagatcataaatataacttaatccatgaagaactcagccagttaaga
gaacttttaggagataaaaccttaaaagtcattgttgaaatgcaggcaatagaagacagt
gaaaaagcaagtattgcaaaagtactggaagaaaataaagtggatttcatcaaaacatcc
acaggattcattgccccagacaatatttattcaaaagttaatgatattaacataatccaa
aaatatgcaccacaacttaaaattgaaatttatggtggcgtagatacatataaattagct
aatcagcttttaacaggtggggctgatttaatcggcagtgacaacggatacgaaattgta
gataaataccgtactttaagagaaaacactcaagtaacaccaaaaccaataagattcgat
tag
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