Methanobrevibacter smithii: Msm_0906
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Entry
Msm_0906 CDS
T00539
Name
(GenBank) transcription termination factor, NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
msi
Methanobrevibacter smithii
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msi03021
]
Msm_0906
03009 Ribosome biogenesis [BR:
msi03009
]
Msm_0906
Transcription machinery [BR:
msi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Msm_0906
Ribosome biogenesis [BR:
msi03009
]
Prokaryotic type
rRNA transcription factors
Msm_0906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_2
KH_5
KH_KhpA-B
KH_NusA_C
KH_1
Vps16_N
Motif
Other DBs
NCBI-ProteinID:
ABQ87111
UniProt:
A5ULN3
LinkDB
All DBs
Position
complement(869655..870086)
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AA seq
143 aa
AA seq
DB search
MSIKFTANEIRYIALFENMTGAMVKDCIIDDEHGKVTFVVKNGDMGLAIGKGGSTVSKVQ
RAVDKGIEIVELSDDSIQFIKNLLSPAEVQGVKVLQKESGEKIATVTADNTNKRIAIGKN
GVNIERAKLIAKRQHNINNIILK
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atgtctattaaattcactgcaaatgaaattagatacatagctctttttgaaaacatgact
ggagcaatggttaaagattgtattatcgatgatgaacatggtaaagtcacatttgtcgtg
aaaaacggtgatatgggattagctattggaaaaggcggaagcactgtttccaaagttcaa
agagcagtagataaaggaattgaaatcgttgaattgtccgacgattcgattcaatttatt
aaaaatcttttatcccctgcagaagtacaaggtgttaaagtacttcagaaggaatcaggt
gaaaaaatagctactgttacagcagataataccaacaaacgtattgctattggtaaaaac
ggcgttaatatcgaaagagctaagttaattgcaaaaagacaacacaatataaacaacatt
attttaaaatag
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