Methanobrevibacter smithii: Msm_0955
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Entry
Msm_0955 CDS
T00539
Name
(GenBank) type II DNA topoisomerase VI, subunit B
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
msi
Methanobrevibacter smithii
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msi03032
]
Msm_0955
Enzymes [BR:
msi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Msm_0955
DNA replication proteins [BR:
msi03032
]
Prokaryotic type
DNA Topoisomerases
Msm_0955
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Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c
HATPase_c_3
TACO1_YebC_N
Motif
Other DBs
NCBI-ProteinID:
ABQ87160
UniProt:
A5ULT2
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Position
916115..917830
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AA seq
571 aa
AA seq
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MRRKNLSQQANELFDNFQQLTPSEFFRKNKQMLGFTGKIRSLTIVFHELITNSFDAAEEA
GILPEINIELKRIDKEHYILRHSDNGPGIPEDFVMQVYCSMFAGSKFRNIQSRGQQGLGC
SGCVLLSQMTTGEPARVISCYQEGDDLKGVKMKFKMDVKKNKGMLMEREDFPAEHTGVCI
ELQFKDVSYSMAEQGAFEYIRRTMIGNPHAKITFRDPTGHKYIFKRAANIVPILPKEVLP
HPKGVSADDILFMAKHTDKRRYKSMLTSSLSRMSNKRVNEIEELTGIDMNKRPKDMTWAE
AEAIVNCFKKMKFMAPPSNGLIPIGSEQIEKGMKQILKPEFIATLTRKPVTYGGGVSFII
EAGIAYGGDSGRVVNEQRKSEIMRFANRVPLTFDQGSCAITEALKSIDWKRYGIKDFDNS
PVTLFVNIISTQVPYLSTGKQSVSPEPEIVHEIRQATMTLARKLQKHLRAKKAAKEKAMR
SKVFEDYLPVIIEEAAKLGETAVPEYNQVLAKVTKRALAELLGEKVEEEEEEVEEEALIM
EELDEFGYAVDDDHSNLKNIEEDIPEYEKEE
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
ttgaggaggaaaaatttgtctcaacaagcaaatgaactctttgacaatttccaacaattg
acaccatcagagttctttagaaaaaacaagcaaatgttaggattcactggtaaaatccgc
tcattaacaattgtttttcacgaattgattacaaacagttttgatgcagctgaagaagca
ggtatccttccagaaatcaatattgaattaaaaagaattgacaaagaacattacattctc
agacattcagataacggtccgggaattcctgaagactttgtaatgcaggtatactgtagt
atgtttgcagggtccaagttcagaaacatccaatcaagagggcaacaaggtttaggttgt
agtggttgtgtgcttttatcacaaatgactactggtgaacctgcccgtgtaatctcctgt
tatcaagagggagatgacctcaaaggagttaaaatgaaatttaaaatggatgttaagaaa
aataaaggtatgttaatggaaagagaagatttccctgcagaacatactggagtttgtata
gaattacaattcaaagatgtttcttactctatggcagaacagggtgcttttgaatacatc
agaagaaccatgattggaaaccctcatgcaaaaattacatttagagacccgacaggacac
aaatacatattcaaaagagctgcaaatattgttccgatacttccaaaagaagttttacca
catccaaaaggagttagtgcagatgatatcctctttatggccaaacatactgataaaaga
agatacaaaagtatgttaaccagttcactttccagaatgtccaataagagagtaaacgaa
attgaggaactaaccggtattgatatgaataaacgtccaaaagatatgacctgggcggaa
gcagaagctatcgtaaactgcttcaaaaaaatgaaattcatggcgcctccaagtaacgga
ctcatacctatcggatcagaacaaattgaaaaaggtatgaaacaaattctcaaacctgaa
ttcatagccacacttacaagaaaacctgtaacttacggaggaggtgtttctttcattatt
gaagcaggaatcgcttatggtggagattcaggaagagttgtaaatgaacaaagaaaatca
gagattatgaggtttgcaaatagagttccattaacctttgaccaaggaagctgtgcaatt
acagaagcactgaaaagtattgattggaaacgttatggaattaaagacttcgacaattcc
ccagttactttatttgtaaatattatttcaacacaggtcccttacctttctacaggaaaa
caaagtgtatctccagaacctgaaattgttcatgaaataaggcaagctactatgacttta
gcccgtaaacttcaaaaacacttaagagctaaaaaagctgcaaaagaaaaagcaatgcgt
tcaaaagtatttgaagactaccttccagttattattgaagaagctgcaaaattaggagaa
actgcagtacctgaatataatcaggttttagctaaagtaactaaaagagctcttgctgaa
ttacttggtgaaaaagttgaagaagaggaagaagaagtagaagaagaagcattgattatg
gaagaacttgatgaatttggatatgctgttgatgacgaccacagtaatcttaaaaacatt
gaagaagacattccagaatatgaaaaagaagaataa
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