Methanobrevibacter smithii: Msm_1098
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Entry
Msm_1098 CDS
T00539
Name
(GenBank) holliday junction resolvase
KO
K03552
holliday junction resolvase [EC:
3.1.21.10
]
Organism
msi
Methanobrevibacter smithii
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msi03400
]
Msm_1098
Enzymes [BR:
msi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Msm_1098
DNA repair and recombination proteins [BR:
msi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Msm_1098
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hjc
PH_TRF2_HOY1
Motif
Other DBs
NCBI-ProteinID:
ABQ87303
UniProt:
A5UM75
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All DBs
Position
complement(1050311..1050718)
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AA seq
135 aa
AA seq
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MAKKGSAEERDLVHKLWERDFAAMRAPASGGATKKPLPDVVAGNGKLYLAIEVKTTTKDK
IYIDFPQIDALCEFSEKFGAKPYIGVKFKYTKWLFLEPEKTPRTKSDNYKIEKDFALEKA
LEIDEITGIDRQMKF
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaagggtctgctgaagaaagagatttagtgcataaactttgggaaagagat
tttgcagctatgagagctccagcttctggaggtgcaactaaaaaacctttacctgatgtt
gtagcaggaaacggtaaattatatttagctattgaagttaaaactacaactaaagataaa
atttacatagattttcctcaaattgatgcattatgtgagttttctgaaaaattcggtgct
aaaccatatattggagttaaatttaagtacacaaaatggttatttttagaacctgaaaaa
actccacgtaccaaaagcgataattataaaattgaaaaagattttgccctagaaaaagct
ttggaaattgatgaaattaccggcattgataggcaaatgaaattttga
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