KEGG   Methanobrevibacter smithii: Msm_1177
Entry
Msm_1177          CDS       T00539                                 
Name
(GenBank) replication factor C, large subunit, RfcL
  KO
K04800  replication factor C large subunit
Organism
msi  Methanobrevibacter smithii
Pathway
msi03030  DNA replication
Brite
KEGG Orthology (KO) [BR:msi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Msm_1177
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msi03032]
    Msm_1177
DNA replication proteins [BR:msi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     Msm_1177
SSDB
Motif
Pfam: AAA RCF1-5-like_lid Rad17 RuvB_N AAA_14 AAA_16 AAA_22 nSTAND3 AAA_5 DNAX_ATPase_lid DUF815 NACHT RNA_helicase NPHP3_N TIP49 AAA_33 AAA_assoc_2 ResIII NB-ARC Parvo_NS1 Mg_chelatase IstB_IS21 Bac_DnaA AAA_28 AAA_7 TniB ABC_tran ATPase_2 AAA_19 AAA_18 Sigma54_activ_2 Viral_helicase1 TsaE AAA_24 AAA_17 AAA_25 AAA_30 PduV-EutP NAF
Other DBs
NCBI-ProteinID: ABQ87382
UniProt: A5UMF4
LinkDB
Position
1158925..1160403
AA seq 492 aa
MLWTDKYRPKTLDEVVGNNKEKALIQKWVDNWKAGNPQKPLLLVGPPGIGKTTLAQAIAR
EFSEYIELNASDKRSQDVIKSTIGESSSSKSLFGDDYKLLILDEVDGIHGTNDRGGVRAI
GDIIKKAKHPMILIANDFYSKRIASLKTKCDVLKMSKVRSPSINKLLKQIAINEGIKANP
AALKELAKKSNGDMRSAINTFQALANQNEVLELSDIENITTKDDRSTIINGVTAVLKSKN
PNHVKKALMVEEDPTLVMEYIAENIPREYTKKKEIKKAYENIAKADLYFGRARSSRYYGY
WKYATDFMGVGVSDAKDETYKKFTRITSPTVFTLMGRNRGKRNLRDRIAEKMSQKLHISH
SVAISMFPYLEIMFENNELAWEISDFLGFEEDEIKRFRTRKIPKKVIEKMEKQKAQKRVE
QRDARAQEIQDGLMATIPPQKEVKEEPTEEIQEEVVDEIKEETVEEIQEESQKEVEEKPK
KKTDKQVSLFNF
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgttatggacagacaaataccgaccaaaaacactggatgaagtggttggcaataacaaa
gaaaaagcattaatccaaaaatgggtggataactggaaagcaggaaatccgcaaaagcca
ttactcctagttggacctccaggaattggaaaaacaacacttgctcaagcaatagcccga
gaattctcagaatacatagaactaaatgcaagtgataaacgttctcaggatgttattaaa
agcactattggagaatcctcttccagcaaatcattatttggagatgactacaaactactt
attcttgatgaagtagacggaattcacggaactaatgaccgaggaggagtaagagctatt
ggagacattattaaaaaagcaaaacatccaatgattctaatagctaatgacttttattca
aaacgtattgcatcacttaaaacaaaatgtgatgttttaaaaatgagtaaagtcagaagc
ccgagtattaacaaattacttaaacaaatagccattaatgaaggaattaaagcaaatcct
gcagcacttaaagaactggctaaaaaatctaatggagatatgcgttcagcaataaacaca
ttccaagcactggctaatcaaaatgaagttcttgaactaagtgatattgaaaacataact
acaaaagatgacaggtcaacaataatcaatggagttactgctgttttaaaaagtaaaaat
cctaaccatgttaaaaaagcattgatggttgaagaagacccgacacttgtaatggaatac
attgcagaaaatattccccgtgaatacacaaagaaaaaggaaatcaaaaaggcatatgaa
aatattgccaaagcggatttgtactttggaagagctagaagcagcagatactacggctat
tggaaatatgcaactgatttcatgggagttggagtcagtgatgcaaaagacgaaacttac
aaaaagtttacaagaatcacttcccctacagtatttacattaatgggacgaaacagagga
aaaagaaacctcagagacagaatagctgaaaaaatgtctcaaaaactacatatttcacac
agcgtagctatttcaatgttcccctatcttgaaatcatgtttgaaaacaatgaacttgcc
tgggaaatatctgactttttaggttttgaagaagacgaaataaaacgtttcagaaccaga
aaaatacctaaaaaagttattgaaaaaatggaaaaacagaaagctcaaaaaagagttgaa
caaagagatgcaagagctcaggaaatccaggacggattaatggctacaatcccacctcaa
aaagaagttaaagaggaacctactgaggaaatacaagaagaagttgttgatgaaataaaa
gaagaaactgttgaggaaatacaagaagaatctcaaaaagaagttgaagaaaaacctaaa
aagaaaactgacaaacaagtttccttattcaacttctaa

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