Methanobrevibacter smithii: Msm_1271
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Entry
Msm_1271 CDS
T00539
Name
(GenBank) DNA polymerase II, small subunit
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
msi
Methanobrevibacter smithii
Pathway
msi03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Msm_1271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msi03032
]
Msm_1271
Enzymes [BR:
msi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Msm_1271
DNA replication proteins [BR:
msi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
Msm_1271
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABQ87476
UniProt:
A5UMP8
LinkDB
All DBs
Position
complement(1274373..1276088)
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AA seq
571 aa
AA seq
DB search
MTNKILLKFAKKGINLSPEAYKKVLEAENPLDFTSSLIVKLKGGDFKSKDLVSVSGQTVD
EIMRNSTIEKSTTRPQLTQKETKKPTVEPKPKEETKKPTVEPKPKEETKKPTVEPKPKEE
TKKPSSISDFKKESDVKEKYVNKENAEALETVENKKVKFKRNLTKTNVEYDFKIIQDTSK
KSYTSGELENLIAYFQSRYEKLANILVKRPELKNYTKVADIEEGQSNLSLILMVREIRST
KNGHKLIEFEDDTGTIPILFSNKNEEVFKEAEKLVKDEVIGVLADKNGDLAIGNEIINPG
VMRIPKKEMDFSIVFLSDVHIGSLTFLEDAFTRFIDWINCEFGNEEQVKIAESVKYLVIG
GDIVDGIGVYPNQEKELAIKDITQQYNEAARFLGNIRSDIKIIIAPGNHDASRVAEPQPA
VPEEYAKALYELDNVEFISNPGVVSLDGINVLIYHGRSFDDLVMAVKEFTHEKNDLLMEE
LLKKRHLAPIYGERTPLASELEDYLVIDEVPDVFHTGHVHINTHKKYNGIHLINSGTFQT
QTEFQKIYNIEPTPAEVPVLYKGKYKCLKFI
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgactaataaaattttattaaaatttgcaaaaaagggaattaacctatcaccagaggct
tataaaaaagttcttgaagctgaaaatcctctagattttacctcttcattaattgttaaa
ttaaaaggaggtgattttaaatctaaagatttagtttcagttagcggtcaaactgttgat
gaaataatgagaaatagcacaattgaaaaatcaacaacaagacctcaattaacacaaaaa
gaaactaaaaaacctactgtagaacctaaacctaaagaagaaactaaaaaacctactgta
gaacctaaacctaaagaagaaactaaaaaacctactgtagaacctaaacctaaagaagaa
actaaaaaaccatccagcattagtgattttaaaaaagaatctgatgttaaagaaaaatac
gttaacaaggaaaatgcagaagctttagaaactgtagaaaataaaaaagtcaaatttaaa
aggaatttaacaaaaacaaatgtagaatatgactttaaaatcatacaggacacaagtaaa
aaatcatacacaagtggagaacttgaaaacttaattgcttatttccaaagcagatatgaa
aaattagctaatattctggttaaaagaccggaacttaaaaattacacaaaagtagctgat
attgaagaaggtcaaagtaatttaagccttattttaatggttagggaaatcagatccact
aaaaatggccataaacttattgaatttgaagatgatacaggaactattccaatactattt
tcaaataaaaatgaagaagtctttaaagaagctgaaaaactagttaaagatgaagttatc
ggtgttcttgctgataaaaatggtgatttggctatcggaaatgaaattataaatcctgga
gttatgagaatacctaaaaaagaaatggatttcagtattgtattcttatctgatgttcac
ataggaagtttaacctttttggaagatgcatttactagatttatagactggattaattgt
gaatttggaaatgaagaacaagtaaaaatagctgaaagtgttaaatatcttgttattggt
ggagatattgtagatggtattggtgtatatccaaatcaggaaaaagaactggctattaaa
gacattactcagcaatacaatgaagcagccagatttttaggaaacattagaagtgatatt
aaaattattattgctcctggaaaccacgatgcatctagagtggcagaacctcaacctgca
gtacctgaagagtatgcaaaagctttatatgaacttgataatgtagaatttataagtaac
cctggtgttgtctctttagacggtattaatgttttaatttaccacggacgtagttttgac
gatttggtaatggcagttaaagagtttacccatgagaaaaacgatttgttaatggaagaa
ttacttaaaaaaagacatttagctccaatttacggagaaagaactccgcttgcttcagaa
cttgaagattatttagtaattgatgaagttccagatgtcttccatacagggcatgttcac
attaacacccataaaaaatacaatggtattcatttaattaattctggaacatttcagact
cagacagagttccagaaaatttataatattgaaccaacccctgctgaagtccctgtactt
tacaaagggaaatataaatgtttaaagttcatttaa
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