Methanobrevibacter smithii: Msm_1292
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Entry
Msm_1292 CDS
T00539
Name
(GenBank) transcriptional accessory protein, S1 RNA binding family, Tex
KO
K06959
protein Tex
Organism
msi
Methanobrevibacter smithii
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
Msm_1292
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
HHH_9
S1
HHH_7
YqgF
S1_RRP5
T2SSK
HHH_6
OVT1
Motif
Other DBs
NCBI-ProteinID:
ABQ87497
UniProt:
A5UMR9
LinkDB
All DBs
Position
complement(1296853..1299000)
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AA seq
715 aa
AA seq
DB search
MIAKTLEKELNLEQWQVNKVIRLIDEGNTIPFIARYRKDVTGSLNDELLRKFDERLKYLR
NLEDKKTKIIERIDNLGKLDDNLKNQILNAETLVELDDLYRPYKSKKRTRATIAKQKGLE
PLASLILAQEVKEPVSKIAENYVTDEVKTPKEAIEGAQDIIAEIISDNSTFRKKIRQNTF
YNGVIETKAKNKDESASGYEIYFNYSEKLSKIPPHRILAINRAENEDIIKVKVDIEEDDI
IQYLKRHTLKNCSKVPEMIEYNPHTTPIITESIEDSYKRLISPAIEREIRSYLTKKAEEK
SIEVFAKNLSQLLMESPLSGKTILGWDPAFRTGCKLAVIDSTGKVLETSLIYPTEPQNKV
KESEKVVLDLIKKYDVDVIAIGNGTASRESEEIVANIIKNTSVEYIIVNEAGASVYSASK
LADEEFPDFNEGERSAVSIARRLQDPLAELVKIDPKSIGVGQYQHDMNQKQLNESLGGVV
ERVVNEVGVDLNTASSSLLNYVSGITKSTAKNIISYREENGKFNNRKELLNVKKLGKKTF
EQCAGFVKIDNPEHPLDNTTIHPESYDAAVKLLDKLGYSLADIGSDNLKLDNLNYDELSK
QLDVGVITLQDIVKELKKPGRDPREDMPKPVLRKNVLSIDDLEEGMIMQGTVRNIVDFGA
FVDIGVHQDGLVHISQLADKFVKHPLDIVSVGDIVDVKVLDVDLARNRIQLSMLI
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatagctaaaacactcgaaaaagaattaaacctggaacaatggcaagtaaacaaagta
atcagattaattgatgagggcaacactattccatttattgcaagatacagaaaggatgtt
accggctctttaaatgatgaacttttaagaaaattcgatgaaaggcttaaatatcttaga
aacttggaagataaaaaaaccaaaatcatagagcgcattgacaacttaggaaagttagac
gacaacttaaaaaatcaaattcttaatgcagaaacattagtggaacttgatgatttatat
aggccctataaaagcaaaaaaaggacacgtgcaacaatagcaaaacaaaaaggtttggaa
ccgctggccagtcttattttggctcaggaagttaaagaacctgtttccaaaatagctgaa
aattatgttacagacgaagttaaaacacccaaagaagctattgaaggagcgcaagacata
attgctgagattatttctgacaattccacttttagaaaaaaaatcagacagaatactttt
tataatggagtaattgaaactaaagctaaaaataaagatgaatctgcttcaggatatgaa
atttattttaattattcagaaaaactatctaaaattccaccacataggatattagccatt
aacagagcggaaaatgaagacattattaaagtaaaagtggatattgaagaagacgacatt
atccaataccttaaaagacacacacttaaaaactgctccaaagttcctgaaatgattgaa
tataaccctcataccaccccaattattacagaatctattgaagattcatataaacgtttg
atttcaccggctattgagcgggaaattagaagttatttaactaaaaaggctgaagagaaa
tctattgaagtttttgctaaaaatttaagccaacttcttatggaaagccccttaagtgga
aaaactattttaggatgggatcctgcttttagaacaggatgtaaattagctgttattgat
tcaacaggtaaagttttagaaacatccctaatctatccaactgaacctcaaaataaggtt
aaggaatctgaaaaagtggtacttgatttaattaaaaagtacgatgtcgatgtaatagct
atcggaaatggaactgcttcaagggaatctgaagaaatagtggctaatattattaaaaac
acttctgttgaatacatcattgttaatgaagctggcgcatctgtttattctgcaagtaaa
ctggctgatgaagagtttcctgattttaatgaaggtgaacgcagtgctgtttcaatagcc
agaagactgcaggatccgttggctgaacttgttaaaattgatcccaaatctattggagtt
ggtcagtaccagcatgacatgaatcagaaacaattgaatgagtctttaggaggagttgtt
gaaagagtagttaatgaagttggtgttgatttaaatactgcttcatctagcttacttaat
tatgtttccggaattaccaaatcaactgctaaaaatatcattagctatagagaagaaaac
ggtaaattcaacaaccgaaaagaacttttaaatgttaaaaaacttggtaaaaagactttt
gagcaatgtgcaggatttgtaaaaatagacaatcccgaacatcctttagacaacactaca
atacatcccgaatcttacgatgctgcagtcaaacttttagataaattgggatacagtttg
gcagatatcggttcagataacttaaaattagataacctgaattatgatgaattatctaag
cagttagacgttggtgttattaccctgcaggatattgttaaagaacttaaaaaacctgga
agagatcctcgtgaagacatgccaaaacctgttttaagaaaaaatgttttatcaatagat
gatctagaagaaggcatgattatgcagggaactgttagaaatattgttgattttggagct
tttgtagatattggagttcatcaggacggattagtccatatttcacagctggctgacaaa
tttgtaaagcaccctctggatattgtaagtgtcggagatattgttgatgttaaggtttta
gatgttgatttagctagaaatagaatacaattatcaatgttaatataa
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