KEGG   Methanobrevibacter smithii: Msm_1360
Entry
Msm_1360          CDS       T00539                                 
Name
(GenBank) signal recognition particle GTPase SRP54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
msi  Methanobrevibacter smithii
Pathway
msi02024  Quorum sensing
msi03060  Protein export
msi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:msi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Msm_1360
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Msm_1360
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Msm_1360
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:msi02044]
    Msm_1360
Enzymes [BR:msi01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Msm_1360
Secretion system [BR:msi02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Msm_1360
  Eukaryotic Sec-SRP protein
   Msm_1360
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA ATP_bind_1 Zeta_toxin G-alpha cobW AAA_18 AAA_33 AAA_17 GTP_EFTU ResIII AAA_28 AAA_19 6PF2K Arf MMR_HSR1 nSTAND3 MobB DO-GTPase2 APS_kinase AAA_16 AAA ATP-synt_F KAP_NTPase Baculo_p48 nSTAND_NTPase7 Thymidylate_kin YqeC Glyco_transf_4
Other DBs
NCBI-ProteinID: ABQ87565
UniProt: A5UMY7
LinkDB
Position
1382627..1383970
AA seq 447 aa
MAMLGNLGENLTKTMKKLVGISVIDKKTIEEVVKEIQRALIQSDVNIALVLDLSKKIKKR
ALEEEPPKGITPREHVITIIYEEMVNLLGGEAPGLDIDVKPYKILFLGLQGSGKTTTIGK
LCRYLQKKGFNPAVVCTDTWRPAAYEQLRQLTEEMQVPLYGDPDNKDALDLAQKGLKEFK
NRKVIIFDTAGRHKQEEDLIAEMDTLDDIIQPTESILVIDGTIGQQAGEQAKAFSQATDV
GSIIITKLDGSAKGGGAMSAVAETGAPIKFIGTGERIDDFELFDPARFISRLLGMGDIQT
LIEKAEDSIDEDMAEKTMKNMMSGKFTLVDMKNQFEMMNSMGPMQQVLSMIPGLGNKVSK
EASKMTEDKIDGYKVIMSSMTKKEMENPKLIKQSRIRRIAMGAGVEESEVRDLLKYYNNT
KKTMKGIGKRGRFGNNSMNRMMGQFMK
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggcgatgcttggaaatttaggtgaaaatcttactaagactatgaaaaaattagtagga
atatcagttattgataaaaaaacaatagaggaagttgtaaaagaaatacaacgtgcttta
attcaatctgatgttaatatcgctttagttttagatttatccaaaaaaattaaaaaaagg
gctcttgaagaggaacctccaaaaggtattactccaagagagcatgttataacaattatt
tacgaagaaatggtaaatctgttaggtggtgaggcaccaggattggatattgatgttaaa
ccttataaaatcttgttcttaggtttgcagggtagtggtaaaacaactactattggtaaa
ttatgcagatatttacagaaaaaaggttttaaccctgctgttgtgtgtacagatacatgg
aggcctgctgcttatgaacagttaagacaattaactgaagaaatgcaggtgccgctctat
ggagatcctgataataaagatgctcttgatttggctcaaaaaggtttgaaagagtttaaa
aacaggaaagtcattatttttgatactgcaggaagacataaacaggaagaagatttgatt
gctgaaatggataccttggatgatattattcagccaactgaatctattcttgtaattgat
ggaacaattggtcagcaagcaggtgaacaggctaaggcattctcacaggcaactgatgtc
ggttctataataattaccaaacttgacggttcagctaaaggtgggggagcaatgtctgca
gtagctgaaactggagctccaattaaatttatcggtactggtgaacgtattgatgatttc
gaattgttcgatccggcaagatttatttcaagattgcttggaatgggagatatccaaacc
cttattgaaaaagccgaagacagcattgatgaggatatggctgaaaaaaccatgaaaaac
atgatgtctggtaaattcacattggttgacatgaaaaatcagtttgaaatgatgaacagt
atggggccgatgcagcaggttttaagcatgattcctggacttggaaataaggtatctaaa
gaggcatctaaaatgactgaagacaaaattgacggatataaagtcataatgtcttcaatg
actaaaaaagaaatggaaaatccaaagttgattaaacagtcacgtattagaagaatagct
atgggtgcaggtgttgaggaatcagaagtaagagacttgttaaaatattacaacaacact
aaaaagaccatgaaaggcattggaaaacgcggacgttttggtaataattcaatgaaccgt
atgatgggtcaattcatgaaatga

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