Methanobrevibacter smithii: Msm_1372
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Entry
Msm_1372 CDS
T00539
Name
(GenBank) diaminopimelate epimerase, DapF
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
msi
Methanobrevibacter smithii
Pathway
msi00300
Lysine biosynthesis
msi00470
D-Amino acid metabolism
msi01100
Metabolic pathways
msi01110
Biosynthesis of secondary metabolites
msi01120
Microbial metabolism in diverse environments
msi01230
Biosynthesis of amino acids
Module
msi_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Msm_1372
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Msm_1372
Enzymes [BR:
msi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Msm_1372
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Gene cluster
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Ribosomal_L7Ae
Motif
Other DBs
NCBI-ProteinID:
ABQ87577
UniProt:
A5UMZ9
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Position
1392778..1393638
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AA seq
286 aa
AA seq
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MDLKGLKFSKMHGIGNDFPIINESAGEVIPEADKAEACRFLCHRHFGVGGDGVLFVTPSD
VADIGYRMFNPDGSEAEMCGNGIRCFGDFVYRKGILKQEKMTVETKSGIKTIEITLENDE
PVLFKVDMGTSTFKTPEIPMASDMDEFLDSPLEVLDTTFNTTAISVGNPHAIIFVDNIDE
IDIDKYGPAIETHEVFPEKINVHFVEVISKNEGKMLTWERGAGVTLACGTGATSTAISGF
KLGLFDSEVLLHLPGGDLKFNVYEKEEELGAFMEGPAQLVFDGEIQ
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaggattaaaattctctaaaatgcatggaatcggtaatgattttccaata
attaatgaaagtgctggagaagtaatacctgaagcagataaggctgaagcatgtaggttc
ctatgccacagacattttggtgtagggggggatggagtattgtttgtaactccttctgat
gtagctgatattggatacagaatgtttaatcctgatggaagcgaagctgaaatgtgcggt
aatggtattagatgtttcggtgattttgtatacaggaaaggtattttaaaacaggaaaaa
atgactgtagaaacaaaatcaggaattaaaaccattgaaattacattagaaaatgacgaa
ccggtattgtttaaagttgacatggggacatctacttttaaaactcctgaaattccaatg
gcatctgacatggatgaatttttagactctccgttagaagtattggacacaacattcaat
acaacagctattagtgtaggcaatcctcatgcaatcatttttgtcgataatattgatgaa
attgacatagataaatatggtccggctattgaaacacatgaagttttccctgaaaaaatc
aatgttcattttgttgaagtgatttccaaaaatgaaggaaaaatgctcacatgggaacgt
ggagctggagttacactagcttgcggaactggagctacttcaacagctatttcaggattt
aaattaggtctttttgatagtgaagttttattgcatcttcctggtggagacttaaaattt
aatgtatatgaaaaagaagaagaattaggggcttttatggaaggtcctgcccaattagta
tttgatggagaaattcagtaa
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