Methanobrevibacter smithii: Msm_1387
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Entry
Msm_1387 CDS
T00539
Name
(GenBank) lysyl-tRNA synthetase (class I), LysS
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
msi
Methanobrevibacter smithii
Pathway
msi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Msm_1387
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
msi01007
]
Msm_1387
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msi03016
]
Msm_1387
Enzymes [BR:
msi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Msm_1387
Amino acid related enzymes [BR:
msi01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Msm_1387
Transfer RNA biogenesis [BR:
msi03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Msm_1387
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
Anticodon_2
tRNA-synt_1g
DUF1993
Motif
Other DBs
NCBI-ProteinID:
ABQ87592
UniProt:
A5UN14
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All DBs
Position
complement(1406540..1408123)
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AA seq
527 aa
AA seq
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MKHWIENIAEELSKRDTDKHVIASGTSISGSIHIGNSCDVFIANAIGKKLRELGKEAQTI
WIADDHDPLRKVPYPLPENYDKYLGMPYSTIPCPDGCCDNFVEHFEKPFLGVMDAYGIEI
EHKSGFEMYKSGVYNDYIRTALENVDRIKEIFNQYRREPLADDWLPYNPICEECGRVNTT
YAYDFDGDIIKYRCDCGHEGEMNIKSGNGKLTWRVEWAARWKIFNVTCEPFGKDHAASGG
SYDVSSIISKEIFDYEAPYPVPYEWITLDGEAMSKSHGVFFSPEQWLAIGPAESLNYYLF
RSKPMKAKDFSPKMSFLDFMDQFDKVEKVFYNEEEAPSEKEGKKFKKIYEIAQINEGSPL
PFRPPYRFLVNAYQIAGNNLEKIFTILKNNSQLTKSFKNKEFCDLNETELKQFQERVDNV
VNWLDTYAPKFVKFQVQEKSVPKLPLTDEQTEFLGKLADLMESKEFNKAEDLHDAMYEIL
EGQGLKPQKGFQAIYKMILGQKQGPRAASFLLSLDKDFVVKRLRQEA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaaacattggattgaaaatatagctgaggaattaagtaaaagagatactgataaacat
gtaattgcaagtggaacctcaatatcaggttctatccatattggaaactcctgtgatgta
tttatagctaatgcaatcggaaaaaaattacgtgaattgggaaaagaagctcaaactatt
tggattgctgatgaccatgacccacttagaaaagttccatacccattacctgaaaattac
gataaatatcttggaatgccttactcaacaattccatgtcctgacggctgttgtgataac
tttgtagaacactttgaaaaaccatttttaggagttatggatgcatacggtattgaaata
gaacataaatccggatttgaaatgtataaaagcggagtctacaatgactacataagaaca
gctctggaaaatgtagacagaatcaaggaaatattcaatcaatacagaagagaacctcta
gcagatgactggttaccatacaatccaatttgtgaagaatgtggaagggtaaataccact
tatgcatatgattttgatggagacatcatcaaatacagatgtgactgcggtcatgaaggt
gaaatgaacattaaatccggaaatggtaaacttacatggagagtggaatgggctgcaaga
tggaaaatatttaacgttacctgcgaaccattcggaaaagaccatgcagcaagtggagga
tcatatgatgtaagtagcattatttcaaaagaaatatttgactacgaagcaccataccca
gttccttatgaatggattactttagacggagaagctatgagtaaatctcatggagtattt
ttcagcccggaacaatggttagctatcggtcctgctgaaagtcttaactactacttattc
agaagcaaacctatgaaagctaaagatttctcacctaaaatgtcatttttagacttcatg
gatcaatttgacaaagtagaaaaagtattctacaatgaagaagaagcaccatctgaaaaa
gaaggtaaaaaattcaaaaaaatctatgaaatagctcaaataaatgaaggcagtcctcta
ccattcagaccgccttacagattcttagttaatgcttaccaaatagctggaaacaattta
gaaaaaatatttacaattcttaaaaacaattcccaattaactaaaagctttaaaaacaaa
gaattctgtgatttgaatgaaacagaattaaaacaattccaggaacgtgttgacaatgtt
gttaactggttagatacttatgcccctaaatttgtaaaattccaagttcaggaaaaaagt
gttccaaaattaccattaactgacgaacagacagaattcttaggcaaattagctgattta
atggaatcaaaagaatttaacaaagctgaagatttacacgatgcaatgtacgaaattctt
gaaggtcaaggattaaaacctcaaaaaggattccaagctatttataaaatgattttaggt
caaaaacaagggccaagagcagcatcattcttattatctcttgacaaagactttgttgtt
aaaagattaagacaggaagcttaa
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