Methanobrevibacter smithii: Msm_1417
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Entry
Msm_1417 CDS
T00539
Name
(GenBank) conserved hypothetical protein Msm_1417
KO
K09720
HTH-type transcriptional regulator, global nitrogen regulator NrpRI
Organism
msi
Methanobrevibacter smithii
Brite
KEGG Orthology (KO) [BR:
msi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msi03000
]
Msm_1417
Transcription factors [BR:
msi03000
]
Prokaryotic type
Helix-turn-helix
Other families
Msm_1417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRD1_2
HTH_12
TBPIP
Ribosomal_S19e
Motif
Other DBs
NCBI-ProteinID:
ABQ87622
UniProt:
A5UN44
LinkDB
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Position
complement(1441995..1443674)
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AA seq
559 aa
AA seq
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MTESEHKIIEILRILNEQNKPTGSKLIAEELKNKGFNLGERAVRYHMQILDEKGYTERMG
YSGRQITELGRKKLDKGIIYDQVDFIYSKFEEMIYLTSFNYMNRAGNVVVNTSTIYDEEA
FNIIKDVFKSGLCVSPYINLKEGNSKEEIQIKTICGTTIDGILLNEGIPTIPLYGGLVKI
RDYVPTKFTELISYKKTSVTPLDAFVAPGMTSVLDVINTGTGTIPANLRLIPSVGRERAL
NIINKLEKIGIGGVMAVSEEGKNMLGVPVPEGMVGIAVSGGVTPFCAAQELGYDIDIKIA
EEIEGFETLSPIADVKKILKPADDKIHAKTPFLLSKSWNLIQKVNFDVETRKGDIIVNVS
YINKDSLDKAIYIMKETYESNPKYINPYYQLVEHPTDYTKIGIATICSLSIDGLLINNGI
MSNPKYGGLLELNESPLFIDLISYNGSSVDPHKIFIAKNMTSITRNIGSNKILASLKEIP
YISRDYAVHLLNILKNIGFSIYKIGKPRELTYNAKVDNYNFGVVAGSGLNLIAALKEKGI
DVEVKAIAKLMKFEKMERL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatcagaacacaaaataattgaaattttaagaatattaaatgagcaaaataaa
cctactggttctaaattaatagcagaagagttgaaaaacaaaggatttaacttaggagaa
cgtgctgttagatatcatatgcaaattcttgatgaaaaaggatatactgaaagaatggga
tattccggcagacaaattacagaactgggcaggaaaaagcttgataaaggtataatctat
gatcaggttgatttcatttattcaaaatttgaagaaatgatttatttgactagtttcaac
tacatgaaccgggcgggaaatgttgtagtaaatacttcaactatttacgatgaagaagca
tttaatataatcaaagatgttttcaaaagtggtctttgtgttagtccttacatcaattta
aaagaaggtaacagcaaagaagaaatacagataaaaacaatatgcggaaccacaattgac
ggaattctgttaaacgaaggaatacctacaatcccactatacggaggattagttaaaatc
agagattatgttccgacaaaatttacagaactgatttcctacaaaaaaacatctgtaaca
cctcttgatgcatttgtagctccgggaatgacttctgtattagatgtgataaataccggg
accggaacaatacctgctaatttacgcctcattccaagtgtagggcgggaacgtgcccta
aacatcataaacaaattggaaaaaattggaattgggggagtaatggcagtttctgaagaa
ggcaaaaatatgttgggagttcccgtacctgaaggaatggttggaatagccgtcagcgga
ggagtgaccccattttgtgcagctcaagaactcggatatgacattgacataaaaatagct
gaagaaattgaaggctttgaaacattatccccaatagctgatgttaaaaaaatacttaaa
cctgctgatgataaaattcatgcaaaaactccatttttactttcaaaatcatggaattta
attcaaaaagttaatttcgatgtggaaactagaaaaggagacattatagtaaatgtttca
tacattaacaaagacagcttagataaagcaatatatattatgaaagaaacctatgaatca
aatccgaaatacatcaacccttactatcagcttgtagaacatccgaccgattataccaaa
ataggaatagctacaatatgcagtttaagtattgacggacttttaataaacaatggaata
atgagcaacccgaaatatggcggattattggaattaaacgaatctcccttatttattgac
ttaatttcttataatggctcttctgttgatccccataaaatattcatagctaaaaacatg
acttcaataacaagaaatatcggatccaataaaatactggccagtttaaaagaaatcccc
tatatttcaagagactatgcagtacatttattaaacatcttaaagaatattggattttca
atttataaaataggcaaaccaagagaactaacatataatgctaaagtagataactacaat
tttggtgttgttgcaggcagtggtctcaacctaattgctgcacttaaagaaaaaggaata
gatgttgaagttaaagctattgcaaaattaatgaaatttgaaaaaatggaaagactgtag
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