Mesoterricola silvestris: METEAL_03030
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Entry
METEAL_03030 CDS
T09355
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
msil
Mesoterricola silvestris
Pathway
msil03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msil00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
METEAL_03030 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msil03021
]
METEAL_03030 (rpoA)
03400 DNA repair and recombination proteins [BR:
msil03400
]
METEAL_03030 (rpoA)
Enzymes [BR:
msil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
METEAL_03030 (rpoA)
Transcription machinery [BR:
msil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
METEAL_03030 (rpoA)
DNA repair and recombination proteins [BR:
msil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
METEAL_03030 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BDU71129
UniProt:
A0AA48GJY6
LinkDB
All DBs
Position
343122..344093
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AA seq
323 aa
AA seq
DB search
MLNISDFQRPRFAEVSASSKTGSYGEFVAYPFERGFATTCGHSLRRVLLSSIQGAAVTNV
RIKGVQHEFTAMPGVWEDITHILLNLKEIPFKLHSSQPQIVTISHKGEGVVTSGSIRCNQ
NVEVMNPDVHIATLGEDGELEMEIQVSMGRGFVTADRNLDEKLGLGFIPLDSNHSPITRV
NYIVEPARVGHSTDYEKLTLQVWTNGTVDPKDAVSDSALILREHFLIFARQDEDAVETEQ
GATILTTEGVNGMLGKSVEELELSVRANNCLRNANITTIGELVQRTEAELMKTKNFGKKS
LQEIKDELARIGLSLGMRIEQEV
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacatcagcgatttccagaggccgcgtttcgcggaggtcagtgcgagctccaag
acgggttcgtacggcgagtttgtcgcctatcccttcgaacgcggtttcgccaccacctgc
ggccattcccttcgccgggtgctgctcagcagcatccagggcgcggccgtcaccaacgta
cggatcaagggcgtgcagcacgagttcacggccatgcccggcgtgtgggaggacatcacc
cacatcctcctgaacctcaaggaaatccctttcaagcttcattcctcccagccccagatc
gtgaccatcagccacaagggcgaaggcgtggtgacctccgggtccatccgctgcaaccag
aacgtggaagtgatgaatcccgacgtgcacatcgccaccctgggcgaggacggggaactt
gagatggaaatccaggtctccatgggccggggtttcgtcaccgccgaccgcaacctggac
gagaagctgggcctggggttcatccccctggattccaaccacagccccatcacccgcgtg
aactacatcgtcgagcccgcccgcgtgggccacagcacggactacgagaagctgaccctc
caggtgtggacgaacggcacggtcgatcccaaggacgccgtgagcgattccgccctgatc
ctccgggagcacttcctcatcttcgcccgccaggacgaggatgccgtggaaaccgagcag
ggcgccacgatcctcaccaccgagggcgtgaacggcatgctgggcaagtcggtcgaggaa
ctggaactgtccgtcagggccaacaactgcctgcgcaacgccaatatcaccaccatcggt
gagctggtgcagcgcacggaagcggaactgatgaagacgaagaacttcggcaagaagtcg
ctccaggagatcaaggacgagctcgctcgcatcggcctctccctcggcatgcgcatcgaa
caagaagtctaa
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