Mesoterricola silvestris: METEAL_05520
Help
Entry
METEAL_05520 CDS
T09355
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
msil
Mesoterricola silvestris
Pathway
msil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
METEAL_05520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msil03019
]
METEAL_05520
03400 DNA repair and recombination proteins [BR:
msil03400
]
METEAL_05520
Enzymes [BR:
msil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
METEAL_05520
Messenger RNA biogenesis [BR:
msil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
METEAL_05520
DNA repair and recombination proteins [BR:
msil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
METEAL_05520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HEM4
HHH
Helicase_Sgs1
CobS_N
Motif
Other DBs
NCBI-ProteinID:
BDU71378
UniProt:
A0AA48KAC5
LinkDB
All DBs
Position
663135..664856
Genome browser
AA seq
573 aa
AA seq
DB search
MPLEKDIQTLRLLFESGERDACRQSLGALRDRYRAEPEAFSAAAIATLKEIAGALREEPD
LKARLKSVFGFDTFRPGQEEVIRAVMAGRDCLAVMPTGAGKSLTYQLPARLLGGTTLVIS
PLIALMKDQVDALVDAGLRATFLNSSLESGERLERIRQLHRGEYELVYAAPEGIEQSVGP
LLDRLDLRLIAVDEAHCISHWGHDFRPAYRNLAGLKARFGHLPVLALTATATSEVRRDII
AQLGMNAPLDYLGSFYRPNLRLHAVKKGGDGPAVREAILDLVRARPGQSGIIYCLSRKST
ESTAEYLRSRGVRAMAYHAGLDAQAREAAQEAFRRDDVDVVTATIAFGMGIDKSNIRYII
HRDLPKSLEGYYQEIGRAGRDGADADCVLFYSWADVMSLERFLDGLDPAVAQVQRKQIRA
MYDFAENRTCRHRALVGHFGERIEACGCSCDACTGRDVLSEIPLAAALSDFRAGKKPKVP
KGNFHNPQPAAPAPVEGGEDAVLFLKLKALRKQIADRRNLPAYIVFSDTTLHQMARFKPG
TPQEMMAISGVGPKKLETYGEEFLRLLAEPLDA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgccccttgaaaaagatatccagacgctgcgcctcctgttcgaatccggggaacgggac
gcgtgccggcagtccctgggggccctgcgggaccgctaccgcgccgagccggaggccttc
agcgccgcggccatcgccaccctgaaggagatcgcgggggccctgagggaggaacccgac
ctcaaggcccggctcaagtcggtgttcggcttcgacaccttccgccccggccaggaggag
gtcatccgcgccgtcatggcgggccgggactgcctggcggtgatgcccaccggggcgggc
aagtccctcacgtaccagctgccggcgcggctcctggggggcacgaccctggtcatctcg
cccctcatcgccctcatgaaggaccaggtggacgccctcgtggacgcggggctgcgggcc
accttcctcaattcgtccctggaatccggggaacggctggagcgcatccggcagctgcac
cggggggaatacgaactggtgtacgcggcgcccgagggcatcgagcagagcgtgggcccg
ctgcttgatcgtttggaccttcgcctcatcgccgtggacgaggcccattgcatcagccac
tgggggcacgacttccgccccgcctaccggaacctggcgggcctcaaggcgcggttcggc
cacctgccggtgctggccttgacggccacggccacctccgaggtgcgccgggacatcatc
gcgcagctgggcatgaacgcgcccctggactacctgggctccttctaccggcccaacctg
cggctccacgccgtgaagaagggcggggacggccccgcggtgcgcgaggccatcctcgac
ctcgtccgggcccggcccgggcagagcgggatcatctactgcctgtcgcgcaaatccacg
gaatccacggcggagtacctgcggagccggggcgtgagggccatggcctaccacgcgggg
ctggacgcccaggcccgggaggccgcccaggaggccttccgccgggacgacgtggacgtg
gtcaccgccaccatcgccttcggcatgggcatcgacaagagcaatatccgctacatcatc
caccgggacctgcccaagagcctggaggggtactaccaggagatcggccgcgccggccgc
gacggcgcggacgccgactgcgtgctgttctactcctgggcggacgtcatgagcctggag
cggttcctggacggcctggaccccgccgtcgcccaggtgcagcgcaagcagatccgcgcc
atgtacgatttcgcggagaaccgcacctgccggcaccgcgcgctggtggggcacttcggc
gagcgcatcgaggcctgcgggtgctcctgcgacgcctgcacggggcgggacgtgctcagc
gaaatcccgctggcggcggcgctgagcgacttccgtgccggcaagaagccaaaggttccc
aagggaaattttcataatccgcagcccgccgcccccgcccccgtcgaggggggggaggat
gcggttttattcttgaaactcaaggctttgcgcaagcagatcgcggaccgcaggaacctc
cccgcgtacatcgttttcagcgacacgacgctgcaccagatggcccggttcaagcccgga
accccccaggaaatgatggctatcagtggagttgggcccaagaaactggagacgtacggg
gaggaatttctccgccttctcgccgagcccctggacgcttga
DBGET
integrated database retrieval system
