Mesoterricola silvestris: METEAL_05910
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Entry
METEAL_05910 CDS
T09355
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msil
Mesoterricola silvestris
Pathway
msil03420
Nucleotide excision repair
msil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
METEAL_05910
03430 Mismatch repair
METEAL_05910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msil03400
]
METEAL_05910
Enzymes [BR:
msil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
METEAL_05910
DNA repair and recombination proteins [BR:
msil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
METEAL_05910
MMR (mismatch excision repair)
Other MMR factors
METEAL_05910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Cas_Cas4
DUF2800
Motif
Other DBs
NCBI-ProteinID:
BDU71417
UniProt:
A0AA48GP51
LinkDB
All DBs
Position
complement(720047..722797)
Genome browser
AA seq
916 aa
AA seq
DB search
MALTDKQREAIAHTTGNLQLIACAGSGKTEVVSQRVVTLLRPVAEGGAGCRPENIVAFTF
TDKAAAELKERIHTRCHDQLGTITGLAEMYVGTIHGFCLELLKSEVPAFMKYEVLNEVQQ
TLFVDRHSRASGLTQSSTLSGSQLKRYTDTKHYIDAMNILREDNAIAPDALAGVSVVEHL
ITYEHVLHSKGYLDYSGILLEAVAELAKNTGLRERLAARIRHVIVDEYQDVNPIQEAVVE
ALHALGASVCVVGDDDQTIYQWRGSDVRNILNFENRYPKVTQIRLEENFRSSEGVVAVAR
DFISKLAHRLPKAMKATASQTYEVGDITALGFDGPDQEADHIAATCHALRGVAIRDGEGE
RGISWSDMAILLRSVRRDGAVVARALASAGIPFVITGMDNLFQTDEAEAARQLFYFLAET
IDEGTLRTAWQRADLGIDPAALNTAIAGASSARRDMKNAAIGQYKVYNLQRQFIAFIEAC
GLREERVPNGRGEIAFYNLGKFSQAISDFESINFHSSPGEKYTSFAGFLQYHAVNAYPEG
WQDNAFVSPDAVRIMTVHQSKGLQWPVVFIPQLVRNRFPAKGGGGRTAWHLIPASAFDNA
VRYKGGDADERRLFYVAVTRAQKFLHLSWAPTPGNRTAQAASDYFQDVLVSNYVKRRAPN
YTERPKLEPQPKSSVANVTLSFSDVKYFFECPYQFKLRILYGFNAPLDEALGYGKSLHDA
LAEVHSRALRGETVNPEESAELVRRHLRAPYAYPALREQLERSAERVIGAYIRRNSDKFR
HVEFSEKAIEIALGDGVSVAGRIDLVRKIETGEVTIVDLKSTDRAQSEAATETQLHIYAL
GYQELTGRRPDYVEIYELDQLKQKSRSVDDEFMVDVRRDVVSAADALRQNKLPPNPSVKT
CGKCDYCQMCSAAKTI
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
gtggcacttacagacaagcaacgcgaggccattgcacacaccaccggcaatctgcaactt
atcgcttgcgccggctccggaaagaccgaagtcgtttcccagcgcgtcgttacattgctg
cgtccggtggcggaaggcggtgctggatgcaggcctgaaaacatcgtcgcgttcaccttc
accgacaaggccgcggccgagctgaaagaacgcatccacacccgctgccacgaccagctt
ggcaccatcactgggctcgccgagatgtacgtcggaaccatccacggattctgcctcgag
ttgctgaaatccgaggtgccggcgttcatgaagtacgaggtgctcaacgaggttcagcag
accctattcgttgatcggcattctagagcctcaggattgacccagagcagcactctcagc
ggctcgcagctcaagcgttacaccgataccaaacactatatcgacgccatgaatatcctc
cgcgaggacaacgcgattgctcctgatgcgctcgccggagtgtcggtggttgaacaccta
atcacgtatgagcacgtgctccacagtaagggttacctcgactactccggcattttgctt
gaggcagtcgcagaactggcaaagaacaccggattgcgggagcgacttgcagctcgcatc
cggcacgtgatcgtcgatgaataccaggatgtaaatccaatccaggaggcggtcgtcgag
gcactgcatgccttaggcgcatcagtctgcgtcgtcggtgacgatgaccagacaatttac
cagtggcgtggcagcgatgtgcgcaacattttgaatttcgagaatcgctatccaaaagtt
acgcagatccggttggaagagaacttccggtcaagcgagggcgtggttgcggtcgcgcgc
gacttcattagcaaactggctcaccgcttgccaaaggcaatgaaggcgactgcctctcaa
acatatgaggttggcgacattaccgcgttgggatttgatggccccgatcaggaggcggat
cacattgccgccacctgccatgccctgaggggcgtggcaatccgcgatggcgagggggaa
cggggcatctcctggtcagacatggcgatcttgctgcgatccgtccgtcgggacggtgcg
gtggtcgcgcgggccctggcctctgccggaattcctttcgttatcacgggcatggacaat
ctattccagaccgatgaagccgaggcggcccgtcaactcttttattttcttgcagaaaca
attgacgagggaacgcttcgcactgcatggcagcgggcggaccttggcattgaccctgcg
gctttgaacaccgccatcgctggcgcgtccagtgcgcgacgcgacatgaagaatgccgca
attggtcagtacaaggtctacaacctgcaacgacagtttattgcattcatcgaagcttgc
ggcctgcgcgaagagcgtgtgccaaacgggcgtggcgagattgcattctataacctcgga
aagttcagccaggcaatctcggacttcgagagcattaatttccattcgagcccgggcgaa
aaatacaccagcttcgcgggatttctgcagtaccacgctgtgaatgcctacccggagggc
tggcaagacaacgcatttgtgagtcccgatgccgtgcgcatcatgactgtccaccaatcg
aaaggactgcaatggccagtagtgttcattccccaactggtcaggaaccggtttcccgcc
aagggtggcggcggacgaacggcttggcaccttattcctgccagcgcctttgacaacgcg
gtgcgctacaagggtggagatgccgacgagcgcaggctcttttatgtggcggttacccgt
gctcagaaattcctgcatctcagctgggcgccaaccccggggaatcggacggcacaggcg
gcatcggattacttccaagacgtcttggtttccaattacgtgaaacgcagggcgcctaat
tacactgagcggccaaagctggagcctcagcccaagtcgtcggtcgccaatgtaacgctg
tcgttctccgacgtgaaatacttcttcgaatgcccttatcagttcaagttgcgtatcctc
tacgggttcaacgcaccacttgatgaggccctcggttacggaaaatcgctgcacgacgcc
ctcgccgaggtccactctcgcgcattgcgcggagaaacagtgaatcccgaagaatcggcg
gaactcgtgcggcggcatctgcgagccccatatgcctacccggcgttgcgggaacaactc
gagcgttcggcagagagggtgattggggcctacatccggcgcaactccgataaattccgg
catgtggagttctctgaaaaggccattgagatcgcactgggtgatggggtgtctgtagca
ggccgaattgaccttgtgcgcaagatcgagacgggtgaagtcactatcgtcgatttgaag
tcgacagatcgagcacagtccgaagcggccaccgaaactcagctccacatttacgcgcta
ggctaccaggaattgaccgggcggcggccggactacgtcgaaatctacgagcttgatcag
ctaaagcagaagagccgttcggtggacgacgaattcatggtggatgtgaggcgggatgtc
gtttctgcggcagacgcccttcgccagaacaagttgccgccgaaccccagtgtgaaaaca
tgcggcaaatgcgactactgtcagatgtgcagtgcagccaagacaatctaa
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