Mesoterricola silvestris: METEAL_07880
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Entry
METEAL_07880 CDS
T09355
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
msil
Mesoterricola silvestris
Brite
KEGG Orthology (KO) [BR:
msil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msil03021
]
METEAL_07880 (rapA)
Transcription machinery [BR:
msil03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
METEAL_07880 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
Tudor_RapA
SNF2-rel_dom
ResIII
DEAD
DUF3553
AvrRps4_C
Motif
Other DBs
NCBI-ProteinID:
BDU71614
UniProt:
A0AA48K794
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Position
complement(950651..953317)
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AA seq
888 aa
AA seq
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MKEPFLPGQRWISRTEPDLGLGTVRQATDRSVTVHFGAAGETRTYASDQAPLRRVEYQAG
DTVRDREDRSLVVEAVARRAGLLVYRGGGRELAEADLGDRLAFSDPLQRLLAGDLEEPGA
FALRVAALEWQHRRRKSPARGFAGGRVELLPHQLHIASEVAGRLAPRVLLADEVGLGKTI
EACLILHRLLLTGRAARVLILLPDSLVHQWFLELYRRFNLWFHIYDEDRCRALEAGGANP
FLDDQLVLCGLGLLAGSPERARQALEAGWDLLVVDEAHHLEGAAYALVEALGAAVPSLLL
LTATPEQLGVPGHFARLRLLDPHRFPDLDAYLRQADDYRAIADLAAGLLAPEPLPPPQAA
ALAALLGPDLGARLEESRPEALNALLDRHGTGRAMFRNTRAAVAGFPARIVHLAPLEPSP
RDPRLDWLADLLRSTGDKVLLICSTRAQAEAIAQGLKPRVRVKAAVFHEGLTLVQRDRNA
AWFAEPGGARILLCSEIGSEGRNFQFAHHLVLYDLPLDPDVLEQRIGRLDRIGQARDVEI
HVPYPRGGAHEVLARWYHEGLDAFRTHLHGGRELLERFRDRLAAPGDVEGLVEATRAARE
ELRARLERGRDRLLELNSFRPGASAALLDELRRLDGDRALEGFLLTLFDRLPVDVEEVGP
RTYQLGSMGVLAEALPGLSADGLTVTFDRERALAREELQFLTWDHPLVSGALDLLLGGGG
GTSCFGRWPDPKASALYLEAVYVLACAAPPQLHVDRFLPPTPLRVVVDAQGRDLTAALPR
ALLARSARPAAGQGLLARPEVRQELLPRMLARAGGLAEARAPRLLAKARQDLAAHLDREI
ERLRALRRVNGGVSEGDIEGLLHQKAALDTHLREARLRLDAIHLVHRG
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggagcccttcctccccggccagcgctggatcagccgcaccgagcccgacctgggc
ctgggcacggtgcgccaggccacggaccgcagcgtcaccgtccatttcggcgccgccggc
gagacccgcacctacgccagcgaccaggcccccctgcgccgggtggagtaccaggccggg
gacaccgtgcgggaccgggaggaccggtccctggtggtggaggccgtggcccggcgcgcg
gggctcctggtgtaccggggcgggggccgggaactggccgaggccgacctgggcgaccgc
ctcgccttcagcgaccccctgcagcgcctcctggccggggacctggaggagcccggcgcc
ttcgccctgcgggtggcggccctggaatggcagcaccgccgccgcaaatccccggcgcgc
gggttcgccgggggccgcgtcgagctccttccccaccagctccacatcgcctcggaggtc
gcggggcgcctggcgccgcgggtgctcctggcggacgaagtgggcctgggcaagaccatc
gaggcctgcctgatcctgcaccggctcctgctcacgggccgcgccgcccgggtcctgatc
ctcctgccggattcgctggtgcaccagtggttcctggagctgtaccggcgattcaacctc
tggttccacatctacgacgaggaccgctgccgggccctggaggccgggggcgccaacccc
ttcctggacgaccagctggtgctgtgcggcctgggcctcctggccggaagcccggaacgg
gcccggcaggccctggaggcggggtgggacctgctggtggtggacgaggcccaccacctg
gagggggccgcctacgccctggtggaggccctgggcgcggccgttcccagcctgctcctc
ctcaccgccacgccggagcagctgggggtcccgggccatttcgcccggctccggctcctg
gacccgcaccgcttcccggacctggacgcctaccttcgccaggcggatgactaccgcgcc
atcgcggacctggccgcgggcctcctggccccggagcccctgccgccgccccaggccgcg
gccctggcggccctgctgggccccgacctgggtgcgcgcctggaggaatcccgccccgag
gccctcaacgccctgctggaccgccacggcacgggccgcgccatgttccgcaacacccgc
gcggcggtggcgggattccccgcgcgcatcgtgcacctggcgcccctggagccctccccc
cgggacccgcgcctggactggctggcggacctgctccgctccaccggggacaaggtcctc
ctcatctgctccacccgggcccaggccgaggccatcgcccagggcctgaaaccccgggtg
cgggtgaaggccgccgtcttccacgagggcctgaccctggtgcagcgggaccggaacgcc
gcgtggttcgccgaacccggcggggcgcgcatcctcctctgctccgagatcggcagcgag
ggacggaatttccagttcgcccaccacctggtgctctacgacctccccctggatcccgat
gtcctggagcagcgcatcgggcgcctggaccgcatcggccaggcccgggacgtggagatc
cacgtgccctaccccaggggcggcgcccacgaggtgctggcgcggtggtaccacgagggc
ctggacgccttccggacccacctccacggcgggcgcgaactgctggagcggttccgggac
cggctggccgcgcccggcgacgtggagggcctggtggaggccacccgcgccgcccgggag
gagctgcgggcccgcctggagcggggccgggaccggctcctcgaactgaattccttccgc
cccggggcctcggcggcgctcctggacgaactgcgccgcctggacggggaccgcgccctg
gagggcttcctgctgaccctgttcgatcgcctcccggtggacgtggaggaggtgggcccc
cgcacctaccagctgggctccatgggcgtcctcgccgaggccctgcccggcctttccgcg
gacggcctcaccgtcaccttcgaccgggagcgggccctggcccgggaggagctccagttc
ctcacctgggaccacccgctggtgagcggcgccctggacctcctgctgggcggcggcggg
ggcacctcctgctttgggcggtggccggaccccaaggcttcggccctgtacctggaggcc
gtgtacgtcctggcctgcgcggccccgccccagctgcacgtggaccgcttcctgcccccc
acccccctgcgggtggtggtggacgcccagggccgggacctcacggcggcgctgccccgg
gccctcctggcgcgcagcgcccggcccgccgccggccagggcctcctggcccggcccgag
gtgcgccaggagctcctcccccgcatgctggcccgggccggcggcctcgcggaggcgagg
gcgccccgcctcctggccaaggcccggcaggacctggccgcacacctggaccgggagatc
gagcggctgcgggccctgcgccgggtgaacggcggtgtgagcgagggggacatcgagggg
ctcctgcaccagaaagccgccctggacacccacctgcgcgaagcccggctccgcctggac
gccatccacctggtccaccggggctga
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