Mesoterricola silvestris: METEAL_13230
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Entry
METEAL_13230 CDS
T09355
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
msil
Mesoterricola silvestris
Brite
KEGG Orthology (KO) [BR:
msil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msil03032
]
METEAL_13230 (hupB)
03036 Chromosome and associated proteins [BR:
msil03036
]
METEAL_13230 (hupB)
03400 DNA repair and recombination proteins [BR:
msil03400
]
METEAL_13230 (hupB)
DNA replication proteins [BR:
msil03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
METEAL_13230 (hupB)
Chromosome and associated proteins [BR:
msil03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
METEAL_13230 (hupB)
DNA repair and recombination proteins [BR:
msil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
METEAL_13230 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Arteri_nsp7a
Motif
Other DBs
NCBI-ProteinID:
BDU72149
UniProt:
A0AA48GLR9
LinkDB
All DBs
Position
complement(1620824..1621120)
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AA seq
98 aa
AA seq
DB search
MNKAELISAVAEKADINKSKAAAALDTIIASVSAALRAGDKVTLVGFGTFSVATRGPRTG
RNPRDGAKIKIAAKKVAKFKPGKKLADDVNGKGGKKKK
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggccgaactgatcagcgccgtcgctgaaaaggctgacatcaacaagtccaag
gccgccgccgccctggataccatcatcgccagcgtctccgccgccctgcgcgccggcgac
aaggtcaccctcgtcggcttcggcaccttctccgtcgccacccgtggcccccgcaccggc
cgcaacccccgcgacggcgcgaagatcaagatcgccgccaagaaggtcgccaagttcaag
cccggcaagaagctcgctgacgacgtcaacggcaagggcggcaagaagaagaagtag
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