Mesoterricola silvestris: METEAL_22370
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Entry
METEAL_22370 CDS
T09355
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
msil
Mesoterricola silvestris
Brite
KEGG Orthology (KO) [BR:
msil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msil03009
]
METEAL_22370 (rlmD)
Enzymes [BR:
msil01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
METEAL_22370 (rlmD)
Ribosome biogenesis [BR:
msil03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
METEAL_22370 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
DUF5632
Motif
Other DBs
NCBI-ProteinID:
BDU73063
UniProt:
A0AA48GZ70
LinkDB
All DBs
Position
2611196..2612371
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AA seq
391 aa
AA seq
DB search
MKSILTIERLAWGGKGVARAEDGRVILVSAPLALFPGEQVEAEVRWKPRHGEGEVTRWVR
RDPRRAQAGCPVAATCGGCELWEAGRETAELKRSMVADLLGRQLPDAPEWRWLEAPADAR
RHRIQLHWTGRDLGYHRRNSHALVPVSACPAASPALSQAIPRFLDALEGRMLPTRPQRWE
LATGTPAGEVYATDEQGRTWNLEPDGWKPFQGGIVHRLGEARLAHRPGGFFQVCPPWAWR
AFGEILDGWELPAGTLYDLYGGVGFFTALLGARVAGSVLVEFDEPAVAWAARNVPGARCV
AADAAEWVPEGLGAPGDLLLLDPPRTGLAPEMCAKLQTAGAGDLVLVGCDGAAFCRDVKR
LEPAWKLEGLAVADLFPLTSHVECVGWFRRA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatcgatcctgaccatcgaacgcctggcctggggcggcaagggggtggcccgggcc
gaggacggccgcgtcatcctggtgtcggcgcccctggcgctcttccccggggagcaggtg
gaggccgaggtgcgctggaagccccgccacggcgaaggggaggtcacccgctgggtgcgc
cgggatccccggcgggcccaggcggggtgccccgtggcggccacctgcggcggctgcgaa
ctttgggaggcgggacgggagacggcggagctcaagcggtccatggtggccgatctcctg
ggccggcagctgcccgatgccccggaatggcgctggctggaggcccccgccgacgcccgc
aggcaccgaatccagctgcactggacgggccgggacctgggctaccaccggcgcaacagc
cacgccctggtgccggtatcggcctgccccgcggcctcccctgccctttcccaggccatc
ccgagattcctggacgccctggaggggcgcatgctgcccacccggccccagcgctgggag
ctggccaccggaacccccgcgggggaggtgtacgccaccgacgagcagggccgcacctgg
aacctggagcccgacggctggaagcccttccagggcggcatcgtccaccgcctgggggag
gcgcggctggcgcatcgccccgggggcttcttccaggtgtgccccccctgggcctggcgg
gccttcggggagatcctggacggctgggagctgccggcgggcaccctctacgacctctac
gggggcgtggggttcttcacggcgctgctgggcgccagggtcgcgggcagcgtgctggtg
gagttcgacgaaccggccgtggcctgggccgcgcggaacgtgcccggggcccggtgcgtg
gccgccgacgccgcggaatgggtgcccgaaggcctgggcgcgcccggggacctcctcctg
ctggatccgccccgcacgggcctggcccccgagatgtgcgcgaagctccagaccgccggg
gccggtgacctggtgctggtgggctgcgacggcgccgccttctgccgggacgtcaagcgc
ctggagccggcctggaagctggagggcctggccgtggccgatctcttccccctcaccagc
cacgtggaatgcgtgggctggttccgccgggcctga
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