Mesoterricola silvestris: METEAL_26730
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Entry
METEAL_26730 CDS
T09355
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
msil
Mesoterricola silvestris
Pathway
msil03030
DNA replication
msil03410
Base excision repair
msil03420
Nucleotide excision repair
msil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
METEAL_26730 (polA)
03410 Base excision repair
METEAL_26730 (polA)
03420 Nucleotide excision repair
METEAL_26730 (polA)
03440 Homologous recombination
METEAL_26730 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msil03032
]
METEAL_26730 (polA)
03400 DNA repair and recombination proteins [BR:
msil03400
]
METEAL_26730 (polA)
Enzymes [BR:
msil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
METEAL_26730 (polA)
DNA replication proteins [BR:
msil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
METEAL_26730 (polA)
DNA repair and recombination proteins [BR:
msil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
METEAL_26730 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
METEAL_26730 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BDU73499
UniProt:
A0AA48GP38
LinkDB
All DBs
Position
3129929..3132733
Genome browser
AA seq
934 aa
AA seq
DB search
MSEDRLYLIDAFALIFRAYYGNLRMKNGAALTMARMLLALVAQHKPTHIAAVFDRPEPTF
RHEIYPEYKANRAEMPEDLRPQVPLIRDLIRALNIPIVELAGFEADDVMGTLARQACAAG
LPSVIVSPDKDLLQLVSDEGRIQVLNNRDGEVWIDRAGVKERFGVWPEQVVDVLSLMGDA
SDNVKGVEGIGEKGARDLVEQFGNLDAIVAHRAELKRKAHREGLEAALPRLELVRRLVTV
VTDLELPVTLEDLAYKGVDQAQARAAFKALGFEQLTKEFTEVGSAAAPSAARAYRAAATR
ADLVEAVARCREAGLFGLDTETTSIDPTRGHIVGLSLAWKPNEGLYVPLAHLRPGSEDTA
GSLPGLLPDSGLPEGLLDLRGEPGAFFRELAPYLDPRNIPFDEAREVLGPLFLDAAVGKA
GQNLKYDLQVLKRHGMPVRGLAEDSMVLSFLVDSRLRHNLDDLSSRHLDLRPIPFEAVVG
KGKAAKRFDEAEFEKAVQYAAEDADLALQLCGKLQPLLPPDLRRLYAQVDLPLVEALADL
ELEGVRLDVDVLEHLAKAMRVTRDGAADRAFELAGEAFNLNSPAQLGRILYEKLNLPVLK
RTDKTKAPATDEDVLTELAQREDGEIARVLLRHRQMQKLLSTYVEALPAMVSPVTGRLHT
RLHQAAVATGRLASSDPNLQNIPVRTEDGRAIRGAFVPREGWVFLDADYSQIELRVVAAL
AGDPVLLGAFGRGEDIHRRTASEVLGVDMEAVTGEQRSAAKAVNFGLLYGQGAYALSASL
GISFKEAKAFIERYFERMPKVAEWIEATKARAVEEGLVRTLWGRVRRIPDLQSPNQGLKA
QALREAVNTVVQGTAADLMRRAMVRLHRSLEAGGFQSRLLLQVHDELLVEAPPAEAEAVA
ALLKDAMEGADDLGPLGVKLAAEVRRGNSWLECK
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaccgcctctacctgatcgacgccttcgccctgatcttccgtgcgtactac
ggcaacctccgcatgaagaacggcgcggccctcaccatggcccgcatgctcctggccctg
gtggcccagcacaagcccacccacatcgccgccgtgttcgaccggcccgaacccaccttc
cgccacgagatctaccccgagtacaaggccaaccgggccgagatgcccgaggacctgcgg
ccccaggtgccgctcatccgggacctcatccgcgccctgaacatccccatcgtggagctc
gcgggcttcgaggccgacgacgtcatgggcaccctggcccgccaggcctgcgccgcgggg
ctgccgtcggtgatcgtgagcccggacaaggacctcctccagctggtttccgacgagggc
cggatccaggtgctcaacaaccgcgacggcgaggtgtggatcgaccgcgccggggtgaag
gagcgcttcggcgtgtggcccgagcaggtggtggacgtgctgtccctcatgggcgacgcc
tccgacaacgtcaagggcgtggagggcatcggggagaagggcgcccgggacctggtggag
cagttcgggaacctggacgccatcgtggcccaccgcgccgagctcaagcgcaaggcccac
cgggagggcctggaggccgccctgccccgcctggagctggtgcgccgcctggtcacggtg
gtcacggacctggagctgcccgtgaccctggaggacctggcctacaagggcgtggaccag
gcccaggcccgggccgccttcaaggccctgggcttcgagcagctcaccaaggagttcacg
gaggtgggcagcgccgcggcgccgtcggcggcccgggcctaccgggccgcggccacccgg
gccgacctggtggaggccgtggcccggtgccgggaagccggccttttcgggctggacacc
gagacgacctccatcgaccccacccggggccacatcgtgggcctgagcctggcctggaag
cccaacgaggggctgtacgtgcccctggcccacctgcggcccggctccgaggacacggcg
gggtccctgccggggctcctgccggattccggcctccccgaaggcctcctggacctgcgg
ggcgagcccggggccttcttccgggaactggccccctacctggatccccgcaacatcccc
ttcgacgaggcccgggaggtgctggggcccctgttcctggacgcggcggtgggcaaggcc
ggccagaacctgaagtacgacctccaggtgctcaagcgccacggcatgcccgtgcggggc
ctggcggaggacagcatggtgctgagcttcctggtggactcccgcctgcgccacaacctg
gacgacctctcctcccgccacctggacctgcggcccatccccttcgaggcggtggtgggc
aagggcaaggccgccaagcgcttcgacgaggcggaattcgagaaggcggtgcagtacgcc
gcggaggacgcggacctggccctgcagctctgcggcaagctccagccgctgctccccccc
gacctgcgcaggctctacgcccaggtggacctgcccctggtggaggccctggcggacctg
gaactggaaggggtgcgcctggatgtggacgtcctggagcacctggccaaggccatgcgg
gtgacccgcgacggcgccgcggaccgcgccttcgagctcgcgggggaggccttcaacctc
aacagcccggcccagctgggcaggatcctctacgagaagctgaacctgcccgtcctcaag
cgcaccgacaagaccaaggccccggccacggacgaggacgtgctcacggagctggcccag
cgcgaggacggggagatcgcccgggtcctcctgcgccaccggcagatgcagaagctcctc
agcacctacgtggaggcccttcccgccatggtcagcccggtgacgggccggctccacacg
cggctccaccaggccgcggtggccacggggcgcctggcctcctccgaccccaacctccag
aacatccccgtgcgcaccgaggacggccgggccatccgcggggccttcgtgccccgggag
ggctgggttttcctggacgccgactacagccagatcgaactgcgggtggtggccgcgctg
gccggggacccggtcctcctgggcgccttcggccggggcgaggacatccaccggcgcacg
gcctccgaggtgctgggcgtggacatggaagccgtcaccggggagcagcgcagcgccgcc
aaggccgtgaacttcggcctcctctacggccagggcgcctacgccctgtcggcgagcctg
ggcatcagcttcaaggaggccaaggccttcatcgaacggtacttcgagcgcatgcccaag
gtcgcggagtggatcgaggccaccaaggcccgggccgtggaggagggcctggtgcgcacc
ctgtggggccgcgtgcggcgcatcccggacctgcagtcccccaaccagggcctcaaggcc
caggcgcttcgggaggccgtgaacaccgtcgtgcagggcaccgccgccgacctcatgcgc
cgggccatggtgcgcctgcaccggtccctggaggccggggggttccagtcccggctcctg
ctgcaggtgcacgacgaactcctggtggaggcccccccggcggaagccgaggccgtcgcg
gccctcctcaaggacgccatggagggcgccgacgatctggggcccctgggcgtcaagctc
gccgccgaggtgcggcgggggaacagttggctggagtgcaagtga
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