KEGG   Mesoterricola silvestris: METEAL_27920
Entry
METEAL_27920      CDS       T09355                                 
Name
(GenBank) ATP-dependent helicase
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
msil  Mesoterricola silvestris
Pathway
msil03022  Basal transcription factors
msil03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    METEAL_27920
  09124 Replication and repair
   03420 Nucleotide excision repair
    METEAL_27920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msil03021]
    METEAL_27920
   03036 Chromosome and associated proteins [BR:msil03036]
    METEAL_27920
   03400 DNA repair and recombination proteins [BR:msil03400]
    METEAL_27920
Enzymes [BR:msil01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     METEAL_27920
Transcription machinery [BR:msil03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     METEAL_27920
Chromosome and associated proteins [BR:msil03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    METEAL_27920
DNA repair and recombination proteins [BR:msil03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     METEAL_27920
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD HBB ResIII
Other DBs
NCBI-ProteinID: BDU73618
UniProt: A0AA48H073
LinkDB
Position
3276981..3279326
AA seq 781 aa
MSLGLSVREFVAPLEPSGSLDARRALSAEEDPMALGARLHARVQKRLAQEDGTVRAEVAV
QAALDHVGFQVLVRGRVDVLVGSSPPVVEEIKTSFRPDAILRELDEGHPFALQARMYAWI
LWRDGGECPRCRIRIISLQDEGETLVELPFDPRAFSDWVEERLRDLHGAWDRAQARRAER
RELAGSLAFPFPDPRPGQARLVELVASALASGRRLLLQAPTGLGKTAAVLFPALARALAD
DLRVFYCTPRNSQHEVAEDCVRRIRAQGHPVRSVTIKAKEKVCPQAEVDCRPEVCPRADL
YFDRLKASGAVEALMAGGCADAAAVKAAADEHLLCPFELSLDAARHADVIIGDYNYAFAP
NATLVRFFGTPEESARNIVLVDEAHNLPSRAADWFSPALELPWLEELRKRRAAPRDRALR
SRLTAQIKRCAALLQALEGAHRVVELDTQPFLGEEFRIARLLAETAARGVELRPAHPLVE
LQRGWGAFCAVLRILAAPHIVTWIPPGRLQITCADASAHLGERMAGLHSAVLFSATLKPF
LYHRRLAGLAGAEVLEAEVPSPFPPSNRKILVVPQISTLYRLRDREMPRIAHFLGRVLPL
RPGNYFVFFPSFDMLERTLPHLDLPGFQVLAQPRKAGAARILELVRALREGNRTVVLAVQ
GGSLSEGIDLPGEALIGCVVAGPPLPPFDLERDRIRAYFQAAYGCGQAYAYTYPAAAKAV
QAAGRVIRTPGDRGLLVFLDGRFLEAEYAACFPEGWFRESPSELVSGAILGDIAAFWSVR
S
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgagcctgggattatctgtacgggaattcgtggcgcccctggagccttcgggcagcctg
gatgcgcggcgcgccctctccgcggaggaggaccccatggccctgggcgcgcggctccac
gcgcgggtgcagaagcgcctggcccaggaggacggcacggtgcgggcggaagtggcggtg
caggccgcgctggaccacgtggggttccaggtgctggtgcggggccgggtggacgtgctg
gtggggtcctcgcctccggtggtggaggagatcaagaccagcttccggcccgacgccatc
ctccgggagctggacgagggccatcccttcgccctgcaggcgcggatgtacgcctggatc
ctctggcgggacgggggggagtgtccccgctgccgcatccggatcatcagcctccaggac
gagggcgagaccctggtggagctgcccttcgaccccagggccttctcggactgggtggag
gagcggctccgggacctgcacggggcctgggaccgggcccaggcccggcgcgcggaacgc
cgcgaactggccgggagcctcgccttcccctttccggacccccggcccgggcaggcgcgg
ctggtggagctggtggcctcggccctggcctcgggccggcgcctgctcctgcaggccccc
acgggcctgggaaagaccgccgcggtgctcttcccggccctggcccgggccctggccgac
gatctgcgggtcttctactgcaccccccgcaacagccagcacgaggtggccgaggactgc
gtgcgccgcatccgcgcccagggccacccggtgcggtccgtgaccatcaaggccaaggag
aaggtgtgcccccaggccgaggtggactgccgccccgaggtgtgcccccgggcggatctc
tacttcgaccggctcaaggcctccggcgccgtggaggcgctcatggccggcggctgcgcc
gacgccgcggcggtgaaggccgcggccgacgagcacctgctctgccccttcgagctctcc
ctggacgccgcgcgccacgcggacgtgatcatcggggactacaactacgcattcgccccc
aacgccacgctggtgcggttcttcgggacgccggaggagagcgcgcgcaacatcgtgctg
gtggacgaggcccacaacctgccttcgcgcgcggcggactggttcagcccggccctggag
ctcccctggctggaagagttgcgcaagcgccgcgccgcgccccgggaccgggccctgcgc
agccgcctcaccgcccagatcaagcgctgcgccgcgctcctccaggccctggaaggggcc
caccgcgtggtggagctggacacccagcccttcctgggcgaggagttccgcatcgcgcgg
ctcctggccgagaccgcggcgcggggcgtggagctgcgccccgcccatcccctggtggag
ctgcagcggggctggggcgccttctgcgcggtgctgcgcatcctggccgcgccccacatc
gtcacctggatccccccggggcgcctgcagatcacctgcgccgacgcctcggcgcacctg
ggggaacgcatggccgggctccattccgccgtgctcttctcggccaccctcaagcccttc
ctgtaccaccggcgcctggcgggcctggccggggcggaggtcctggaggccgaagtgccc
tccccctttccgccgtccaaccgcaagatcctggtggtgccccagatctccaccctctac
cggctgcgggaccgggagatgccccgcatcgcccatttcctgggccgggtcctgcccctg
cggccgggcaactacttcgtcttcttccccagcttcgacatgctggaaaggaccctgccc
cacctggacctgcccggcttccaggtgctggcccagccccgcaaggccggggccgcgcgc
atcctcgaactggtccgggccctgcgggaagggaaccgcacggtggtgctggctgtgcag
ggggggtccctctcggaaggcatcgatctgcccggggaggccctcatcggctgcgtggtg
gcgggtccgcccctgccccccttcgacctggagcgggaccgcatccgcgcgtacttccag
gccgcctacggctgcggccaggcctatgcctacacctaccccgccgccgccaaggcggtg
caggccgcgggccgggtgatccgcacccccggggaccgggggctcctggtgttcctggac
ggcaggttcctggaggcggagtacgccgcctgctttcccgagggctggttccgggaatcg
ccctccgaactggtgtccggggccattctcggggacatcgcggccttctggagtgtgcga
tcctga

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