Entry |
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Name |
(GenBank) ATP-dependent helicase
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KO |
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Organism |
msil Mesoterricola silvestris
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:msil00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
METEAL_27920
09124 Replication and repair
03420 Nucleotide excision repair
METEAL_27920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:msil03021]
METEAL_27920
03036 Chromosome and associated proteins [BR:msil03036]
METEAL_27920
03400 DNA repair and recombination proteins [BR:msil03400]
METEAL_27920
Enzymes [BR:msil01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
METEAL_27920
Transcription machinery [BR:msil03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
METEAL_27920
Chromosome and associated proteins [BR:msil03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
METEAL_27920
DNA repair and recombination proteins [BR:msil03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
METEAL_27920
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
3276981..3279326
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AA seq |
781 aa
MSLGLSVREFVAPLEPSGSLDARRALSAEEDPMALGARLHARVQKRLAQEDGTVRAEVAV
QAALDHVGFQVLVRGRVDVLVGSSPPVVEEIKTSFRPDAILRELDEGHPFALQARMYAWI
LWRDGGECPRCRIRIISLQDEGETLVELPFDPRAFSDWVEERLRDLHGAWDRAQARRAER
RELAGSLAFPFPDPRPGQARLVELVASALASGRRLLLQAPTGLGKTAAVLFPALARALAD
DLRVFYCTPRNSQHEVAEDCVRRIRAQGHPVRSVTIKAKEKVCPQAEVDCRPEVCPRADL
YFDRLKASGAVEALMAGGCADAAAVKAAADEHLLCPFELSLDAARHADVIIGDYNYAFAP
NATLVRFFGTPEESARNIVLVDEAHNLPSRAADWFSPALELPWLEELRKRRAAPRDRALR
SRLTAQIKRCAALLQALEGAHRVVELDTQPFLGEEFRIARLLAETAARGVELRPAHPLVE
LQRGWGAFCAVLRILAAPHIVTWIPPGRLQITCADASAHLGERMAGLHSAVLFSATLKPF
LYHRRLAGLAGAEVLEAEVPSPFPPSNRKILVVPQISTLYRLRDREMPRIAHFLGRVLPL
RPGNYFVFFPSFDMLERTLPHLDLPGFQVLAQPRKAGAARILELVRALREGNRTVVLAVQ
GGSLSEGIDLPGEALIGCVVAGPPLPPFDLERDRIRAYFQAAYGCGQAYAYTYPAAAKAV
QAAGRVIRTPGDRGLLVFLDGRFLEAEYAACFPEGWFRESPSELVSGAILGDIAAFWSVR
S |
NT seq |
2346 nt +upstreamnt +downstreamnt
atgagcctgggattatctgtacgggaattcgtggcgcccctggagccttcgggcagcctg
gatgcgcggcgcgccctctccgcggaggaggaccccatggccctgggcgcgcggctccac
gcgcgggtgcagaagcgcctggcccaggaggacggcacggtgcgggcggaagtggcggtg
caggccgcgctggaccacgtggggttccaggtgctggtgcggggccgggtggacgtgctg
gtggggtcctcgcctccggtggtggaggagatcaagaccagcttccggcccgacgccatc
ctccgggagctggacgagggccatcccttcgccctgcaggcgcggatgtacgcctggatc
ctctggcgggacgggggggagtgtccccgctgccgcatccggatcatcagcctccaggac
gagggcgagaccctggtggagctgcccttcgaccccagggccttctcggactgggtggag
gagcggctccgggacctgcacggggcctgggaccgggcccaggcccggcgcgcggaacgc
cgcgaactggccgggagcctcgccttcccctttccggacccccggcccgggcaggcgcgg
ctggtggagctggtggcctcggccctggcctcgggccggcgcctgctcctgcaggccccc
acgggcctgggaaagaccgccgcggtgctcttcccggccctggcccgggccctggccgac
gatctgcgggtcttctactgcaccccccgcaacagccagcacgaggtggccgaggactgc
gtgcgccgcatccgcgcccagggccacccggtgcggtccgtgaccatcaaggccaaggag
aaggtgtgcccccaggccgaggtggactgccgccccgaggtgtgcccccgggcggatctc
tacttcgaccggctcaaggcctccggcgccgtggaggcgctcatggccggcggctgcgcc
gacgccgcggcggtgaaggccgcggccgacgagcacctgctctgccccttcgagctctcc
ctggacgccgcgcgccacgcggacgtgatcatcggggactacaactacgcattcgccccc
aacgccacgctggtgcggttcttcgggacgccggaggagagcgcgcgcaacatcgtgctg
gtggacgaggcccacaacctgccttcgcgcgcggcggactggttcagcccggccctggag
ctcccctggctggaagagttgcgcaagcgccgcgccgcgccccgggaccgggccctgcgc
agccgcctcaccgcccagatcaagcgctgcgccgcgctcctccaggccctggaaggggcc
caccgcgtggtggagctggacacccagcccttcctgggcgaggagttccgcatcgcgcgg
ctcctggccgagaccgcggcgcggggcgtggagctgcgccccgcccatcccctggtggag
ctgcagcggggctggggcgccttctgcgcggtgctgcgcatcctggccgcgccccacatc
gtcacctggatccccccggggcgcctgcagatcacctgcgccgacgcctcggcgcacctg
ggggaacgcatggccgggctccattccgccgtgctcttctcggccaccctcaagcccttc
ctgtaccaccggcgcctggcgggcctggccggggcggaggtcctggaggccgaagtgccc
tccccctttccgccgtccaaccgcaagatcctggtggtgccccagatctccaccctctac
cggctgcgggaccgggagatgccccgcatcgcccatttcctgggccgggtcctgcccctg
cggccgggcaactacttcgtcttcttccccagcttcgacatgctggaaaggaccctgccc
cacctggacctgcccggcttccaggtgctggcccagccccgcaaggccggggccgcgcgc
atcctcgaactggtccgggccctgcgggaagggaaccgcacggtggtgctggctgtgcag
ggggggtccctctcggaaggcatcgatctgcccggggaggccctcatcggctgcgtggtg
gcgggtccgcccctgccccccttcgacctggagcgggaccgcatccgcgcgtacttccag
gccgcctacggctgcggccaggcctatgcctacacctaccccgccgccgccaaggcggtg
caggccgcgggccgggtgatccgcacccccggggaccgggggctcctggtgttcctggac
ggcaggttcctggaggcggagtacgccgcctgctttcccgagggctggttccgggaatcg
ccctccgaactggtgtccggggccattctcggggacatcgcggccttctggagtgtgcga
tcctga |