KEGG   Mycobacterium simiae: MSIM_00490
Entry
MSIM_00490        CDS       T07396                                 
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
  KO
K03701  excinuclease ABC subunit A
Organism
msim  Mycobacterium simiae
Pathway
msim03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msim00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MSIM_00490 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msim03400]
    MSIM_00490 (uvrA)
DNA repair and recombination proteins [BR:msim03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MSIM_00490 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MSIM_00490 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran AAA_29 AAA_21 AAA_16 AAA_25 RsgA_GTPase nSTAND1 AAA_23 AAA_33 ScfRs NACHT DnaJ_CXXCXGXG Viral_helicase1 cobW DUF1421
Other DBs
NCBI-ProteinID: BBX38598
LinkDB
Position
complement(60676..63603)
AA seq 975 aa
MADRLIIKGAREHNLRGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGSPH
CPVCGERIARQTPQQIVDQVLAMPEGTRFLVLAPVVRTRKGEFADLFDKLNAQGYSRVRV
DGVVHPLTDPPKLKKQEKHDIEVVVDRLTVKVAAKQRLTDSVETALNLADGIVVLEFPDD
RDEHDHPREQRFSEKLACPNGHPLAVDDLEPRSFSFNSPYGACPECVGLGIRKEVDPDLV
VPDPDRTLAEGAVAPWSAGHTAEYFTRMMAGLGEELGFDVDTPWRKLPAKARKAILEGSD
HQVHVRYRNRYGRTRSYYADFEGVLAFLQRKMEQTESEQMKERYEGFMRDIPCPVCDGTR
LKPEILAVTLTGEFGGERAAKSIAEVSDLCISDCADFLNALTLGPREQAIAGQVLKEIQS
RLGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNR
RLIETLTRLRALGNTLIVVEHDEDTIAHADWVVDIGPGAGEHGGQIVHSGTYQELLANKE
SITGAYLSGRESIATPPHRRPVDHKRKLTVVGAREHNLRGIDVAFPLGVLTSVTGVSGSG
KSTLVNDILAAVLANRLNGARQVPGRHTRVTGLDHLDKLVRVDQSPIGRTPRSNPATYTG
VFDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVC
QGARYNRETLEVHYKGKTISEVLDMSIEEAAEFFEPISGIHRYLRTLVDVGLGYVRLGQP
APTLSGGEAQRVKLASELQKRSTGRTIYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVV
VIEHNLDVIKTSDWIIDMGPEGGAGGGTVVAEGTPEDVAAVPESYTGKFLAEVVGRSAAP
APAKPRPNRRRKVSA
NT seq 2928 nt   +upstreamnt  +downstreamnt
gtggctgaccgcctgatcatcaagggcgcccgcgagcacaacctgcgcggcgtcgacctc
gacctgccgcgcgattcgctgatcgtcttcaccgggctgtcgggatcgggcaagtcgtcg
ttggccttcgacaccatctttgccgaggggcagcgccgctacgtggagtcgctgtcggcc
tatgcccgtcaattcctcgggcagatggacaaacccgacgtcgacttcatcgagggcctg
tcaccggcggtgtccatcgaccagaaatcgacgaaccgaaatccgaggtcgaccgtcggc
acgatcaccgaggtctacgactatctacggctgctctacgcccgggccggcagcccgcac
tgcccggtgtgtggcgagcggattgcccgccagacgccgcagcagatcgtcgatcaggtg
ttggcgatgccggagggcacccgattcctggtgctcgccccggtggtgcgcacccgtaag
ggtgagttcgccgacctgttcgacaagctgaacgcgcagggttacagccgggtgcgggtc
gacggagtggtgcatccgctgacggacccgccgaagctgaagaagcaggagaagcacgac
atcgaggtcgtggtggaccggttgaccgtcaaggtcgccgccaagcaacggctgaccgac
tcggtcgagaccgcgctgaacctcgccgacggcatcgtggtgttggagtttcccgacgat
cgtgacgagcacgaccacccacgtgagcagcggttctccgagaagctggcctgtcccaac
ggacatccgctggccgtcgacgacctggagccgcgatcgttttcgttcaactcgccctac
ggcgcctgccccgaatgtgtgggcctgggcatccgtaaggaggtcgatcccgatctggtg
gtgccggacccggaccgcaccctggccgagggcgccgtggcaccgtggtcggcggggcac
accgcggaatacttcacccggatgatggccggcctcggcgaggaactcggattcgatgtc
gacacgccgtggcgcaagctgccggccaaggcgcgcaaggcgattctcgaaggctccgat
caccaggtccacgtgcggtaccgcaaccgctacggccgaacccgttcgtactacgcggat
ttcgagggggtgctcgcgttcctgcaacgcaagatggagcagaccgaatccgagcagatg
aaggaacggtacgagggcttcatgcgggacatcccgtgcccggtatgcgacgggacccgg
ctcaagccggagatcctggcggtgacgctgacgggggagttcgggggggagcgggctgcc
aagtccatcgccgaggtcagcgacctgtgtatctcagactgcgccgacttcctcaacgcg
ctcaccctcggccctcgcgagcaggcgatcgcggggcaggtgctcaaagagatccagtcg
cggctgggcttcctgctcgacgtggggctggaatatttgtcgctgtcccgggcggcggcc
acgctgtccggcggtgaggcgcaacgcattcggttggccacccagatcggctcgggtttg
gtcggggtgctctacgttctcgacgagccgtccatcgggctgcatcagcgcgacaatcgt
cggctgatcgaaaccctcacgcggctaagggctttggggaacacgctgatcgtcgtcgag
catgacgaggacaccatcgcgcacgccgactgggtcgtcgacatcgggccgggcgccggg
gagcacggcggccagatcgtgcacagcggcacctatcaggagctgttggccaacaaggaa
tccatcaccggcgcctacctgtcgggccgcgaaagcatcgccacgcccccacatcgacgt
ccggttgatcacaagcgcaagctcaccgttgtcggggctcgcgagcacaatctgcgcggc
atcgacgtcgcgttcccgctcggcgttctgacctcggtcaccggtgtgtcgggttccggc
aagtcgacactggtgaacgatattttggcggccgtgctggccaaccggctcaacggcgcc
cggcaggttcccggccggcacacccgggtcaccggcctggaccacctggacaagctggtg
cgggtggatcagtcgccgatcggccgcacgccgcgatccaaccccgccacctacaccggg
gtgttcgacaagatccgcactctgttcgccgcgaccaccgaggcgaaagttcgtggctac
caacccgggcgattctcgttcaacgtcaagggcggccgctgcgaggcatgcaccggcgac
ggcacgatcaagatcgagatgaacttcctgcccgacgtgtatgtcccctgtgaggtgtgc
cagggggcccggtacaaccgggaaacgctggaggtgcactacaagggcaagacgatctcc
gaagtgctggacatgtcgatcgaggaagcggcggagttcttcgaaccgatcagcggaatc
catcgctacctgcgtaccctcgtcgacgtcggtctgggttatgtccggttggggcaaccg
gcgccgacgttgtccgggggtgaggcgcagcgggtgaagctggcgtccgaactgcagaag
cgctcgaccggccggaccatctacattctcgacgagcccaccaccgggctgcatttcgac
gacatccgcaagctgctcaacgtcatcaacggccttgtcgacaaaggcaatacggttgtg
gtgatcgaacacaacctggacgtgatcaagacgtcggactggatcatcgatatgggtccc
gagggcggtgccggcggcggcaccgtggttgccgagggcactccggaggatgtcgctgcg
gtgccggaaagctacaccggcaagtttctcgccgaggtcgtcggccgcagcgctgcgccg
gcgccggccaagccgcgccccaaccggcgccgcaaagtgagtgcttaa

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