Mycobacterium simiae: MSIM_00680
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Entry
MSIM_00680 CDS
T07396
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
msim
Mycobacterium simiae
Pathway
msim03030
DNA replication
msim03410
Base excision repair
msim03420
Nucleotide excision repair
msim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSIM_00680
03410 Base excision repair
MSIM_00680
03420 Nucleotide excision repair
MSIM_00680
03440 Homologous recombination
MSIM_00680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msim03032
]
MSIM_00680
03400 DNA repair and recombination proteins [BR:
msim03400
]
MSIM_00680
Enzymes [BR:
msim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSIM_00680
DNA replication proteins [BR:
msim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MSIM_00680
DNA repair and recombination proteins [BR:
msim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MSIM_00680
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSIM_00680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
BBX38617
LinkDB
All DBs
Position
complement(83833..86544)
Genome browser
AA seq
903 aa
AA seq
DB search
MPAATLIPSEQQTKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLL
RDETPTHVAAAFDVSRQTFRLERYPEYKAGRSETPDEFRGQIDITKEVLAALGITVLAEP
GFEADDLIATLATQAEYEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVV
EKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTASKWIIEYGSLQGLVDNADTVRGKVG
DALRAHLANVIRNRELTELVKDVPMAQTPDTLRLLPWDRDQIHRLFDDLEFRVLRDRLFE
TLAAVEPEVDEGFDVRGGALEPGELAVWLAEHSSGKRFGLAVVGTHLAYDADATALAIVS
ADGDGRYLDTATLGPDDEAALASWLADPGPPKALHEAKLAMHDLAGRGWTLNGVTSDTAL
AAYLVRPGQRSFALDDLSLRYLRRELRAETPEQQQLSLLDDSEGVDDQAVQTLILRAVAV
LDLADALDEELARIDSTSLLAGMELPVQRVLAGMEHTGIAVDMERLSELQSDFAHQIRDA
AEAAYEVIGKQINLGSPKQLQTVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQ
HLLAHRDATRLKVTVDGLLNAVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTEAGR
RIRDAFVVGDGYAELMTADYSQIEMRIMAHLSKDEGLIEAFNTGEDLHSFVASRAFGVPI
QEVTAELRRRVKAMSYGLAYGLSAYGLSAQLKISTEEAKEQMDLYFARFGGIRDYLRDVV
EQARKDGYTSTVFGRRRYLPELDSSNRNVREAAERAALNAPIQGSAADIIKVAMIEVDKA
INEAGLKSRMLLQVHDELLFEIAPGEREQVEALAREKMGGAYPLDVPLEVSVGYGRSWDA
AAH
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgccgcgaccctcattcccagcgagcaacagaccaagccgacactgatgttgctg
gacggcaattcgctggccttccgcgcgttctatgcgctgcccgcggagaacttcaagacc
cgcggcgggctgaccaccaacgcggtgtacggcttcaccgccatgctgatcaacctgttg
cgcgacgagacgccgacacacgttgccgcggcattcgacgtgtcccgccagacgttccgg
ctcgagcggtacccggagtacaaggccggccggtcggaaacccccgacgagttccgcggc
cagatcgacatcaccaaggaagtgcttgccgcgctgggcatcacggtgttggccgagccc
gggttcgaagctgacgacctgattgcgacgctggcgacccaggccgagtacgagggctac
cgggtgctggtggtcaccggtgaccgcgacgcgctgcagttggtcagcgacgacgtcacg
gtgctgtatccgcgtaagggagtcagcgaactcacccggttcaccccggaggcggtggtc
gagaagtacgggttgacccccgcgcaataccccgacttcgccgcgctgcggggcgacccc
agcgacaacctgcccggcatccccggcgtcggggagaagaccgcgtcgaagtggatcatc
gaatacggatcgctgcaggggctggtcgacaacgccgacaccgtgcgcggcaaggtgggc
gacgcgctgcgggcgcacctggccaacgtcatccgcaaccgggagctcaccgaactcgtc
aaggacgtaccgatggcccaaaccccggacacgctgcggctgctgccgtgggatcgcgac
cagattcaccgcctcttcgacgacctggagttccgggtgctgcgcgaccggctgttcgag
accctggccgctgtcgagcccgaggtcgacgagggattcgacgtgcggggtggcgcgctg
gaacccggcgagctggccgtctggctggccgagcacagctcgggcaagcggttcggcctg
gccgtcgtcggcacccacctggcctacgatgccgacgccaccgcgctggccattgtctcc
gccgacggcgacggccgctacctcgacaccgcgacgctgggccccgacgacgaggcggcg
ctggcgtcctggttggccgacccgggtccgcccaaggcgctgcacgaagccaagctggcg
atgcacgatctggccgggcggggctggacgctgaacggcgtcacctccgacaccgcgctg
gccgcctacttggtgcgtccaggccagcgcagcttcgccctcgacgatttgtcgctgcgc
tacttgcgccgcgaattgcgcgctgaaacacctgagcagcaacagctttcgctactcgac
gattccgagggcgtcgacgatcaggcggtgcagacgttgattctgcgggcggtcgcggtg
ctggatctcgccgacgcactcgacgaggaactggcgcggatcgactccacctcgctgttg
gccggtatggaattgccggtgcagcgggtgctggccggcatggagcacaccggtatcgcg
gtggacatggagcgactgagcgagctgcaaagcgatttcgcccaccagattcgcgacgcg
gcggaggccgcgtatgaggtgatcggcaagcagatcaacctaggctcgccgaaacagttg
cagacggtgctgttcgacgagctgggcatgccgaaaaccaagcgcaccaagaccggctac
accaccgacgcggatgccctgcagtcgctgttcgacaagaccggtcacccgttcctgcag
catctgctcgcgcaccgcgatgccactcggctcaaggtcaccgtggacgggttgctgaac
gcggtggcctccgatgggcgcatccacaccacgttcaaccagaccatcgcggcgacaggc
agattgtcgtcgaccgagccgaatctgcagaacattccgattcgcaccgaggccggccgc
cgcatccgcgacgcattcgtggtcggcgacgggtatgcggagctgatgaccgccgactac
agccagatcgagatgcggatcatggcgcacctgtccaaggacgagggcctgatcgaggcc
ttcaacaccggcgaagacctgcattcgttcgtggcctcccgggcgttcggggtgccgatc
caagaggtcaccgccgaactgcgccgccgggtcaaggcgatgtcgtatggactggcctac
gggttgagcgcctacgggctgtccgcgcagctcaagatctccaccgaagaagccaaagag
cagatggacctgtacttcgcccgattcggcgggatccgcgactacctgcgcgatgtcgtt
gagcaggcccgcaaggacggctatacgtccacggtcttcgggcgccggcgctacctgccc
gagctcgacagcagtaaccgcaacgtccgcgaagccgccgagcgcgccgcgctgaacgcg
cccatccagggcagcgccgccgacatcatcaaggtggccatgatcgaggtggacaaggcg
atcaacgaggccggactcaaatcgcgcatgttgttgcaggtccacgacgaattgctgttc
gaaatcgcgcccggcgaacgcgagcaggtcgaggcgctggcccgcgagaagatggggggc
gcctacccgctggacgtaccgctggaggtgtccgtcggctacgggcgctcctgggacgcc
gccgcgcactag
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integrated database retrieval system
