Mycobacterium simiae: MSIM_05620
Help
Entry
MSIM_05620 CDS
T07396
Name
(GenBank) hypothetical protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
msim
Mycobacterium simiae
Pathway
msim00900
Terpenoid backbone biosynthesis
msim01100
Metabolic pathways
msim01110
Biosynthesis of secondary metabolites
Module
msim_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
msim00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MSIM_05620
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
msim01006
]
MSIM_05620
Enzymes [BR:
msim01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
MSIM_05620
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
MSIM_05620
2.5.1.29 geranylgeranyl diphosphate synthase
MSIM_05620
Prenyltransferases [BR:
msim01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
MSIM_05620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BBX39111
LinkDB
All DBs
Position
609075..610280
Genome browser
AA seq
401 aa
AA seq
DB search
MPTASPPSTSKPLDGTIFPTGPNTLEGYLALCKEACDREIQRLYGPADPGSHGLYDLILD
YPLRGGKALRPALSIATCLGLGGHLEAILPTAATLELYHNAFLIHDDIEDESWWRRGKPT
LHIDHGVPIAVNVGDAMLSLSLQPLLDNVERVGLGPALRILRAIAKMTRMTVDGQAIELE
WVRSNTWRLDDADYLTMVELKTSWYTFITPLQAGAIAAGAGPERMPPLESLGRHLGAAFQ
ITDDLLNLRADPEEYGKEIGGDLWEGKRTLMLLHTLRCAEPSDQQRVVRILAKRRPAPDD
ELGLAELLDRLATRGELSQSGRAEIKARLQGHHPSEPKSLSDIRWLYELMQGVGSLQHAR
DVAAEHARKAAAALAGLDWLPPSRHRDLLAALVDYVHGRTR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgccaacggcctcgccgccctccacgtctaaacccctagacggcacaatctttccgacg
ggccccaatacgctcgagggctacctcgccctgtgcaaggaggcgtgcgaccgggaaatc
cagcggctgtacggtcccgcagaccccggctcgcacgggctctacgacctgatcctggac
tatcccctgcgcggcggcaaggcgctgagaccggccctgagcatcgccacctgcctggga
ctcgggggccatctcgaggcgatacttccgaccgcggccacactcgagctgtatcacaac
gcgtttctcatccacgacgatatcgaggacgaatcgtggtggcggcgaggtaaacccaca
ttgcacatcgaccacggcgtgccgatcgccgtcaacgtcggcgacgcgatgttgtccctg
tcgctacagccgttattggacaacgtcgaacgagtggggcttgggcccgcgctgcgcatc
ctgcgcgccatcgccaagatgacccgaatgaccgtcgacggccaggcgatcgaactcgag
tgggtccgctccaacacctggcgcctcgatgatgcggactacctcacgatggtggagctc
aagaccagctggtacacgttcatcacgccactacaggccggtgcgatcgccgccggcgcc
ggacccgagcgaatgcccccactggagtcgctcggtcggcacctcggagcggcctttcag
atcaccgacgatttgctgaacctgcgcgcggatcctgaggagtacggcaaggagatcggc
ggcgatctctgggagggcaagcggaccctgatgttgctgcacacgctgcgatgcgccgaa
ccgagcgaccagcaacgcgtggtgcggattctggccaagcggcgcccggcccccgacgat
gaattgggcctcgccgagctactcgaccgacttgcgacccgaggcgaactatcccagtcg
ggtcgggccgaaatcaaggcccggctgcagggacaccatccgtcggagccgaagagcctc
agcgacattcgctggctctacgaattgatgcagggcgtcggttcgttgcaacacgcccgg
gacgtcgccgctgagcatgcccggaaggcggccgccgcgctggccggccttgactggttg
ccgcccagccgccaccgggacctgctggccgccctggtcgactatgtgcacggacggacc
cgatga
DBGET
integrated database retrieval system