Mycobacterium simiae: MSIM_05620 Help Entry MSIM_05620        CDS       T07396                                  Name (GenBank) hypothetical protein   KO K13789   geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Organism msim  Mycobacterium simiae Pathway msim00900   Terpenoid backbone biosynthesis msim01100   Metabolic pathways msim01110   Biosynthesis of secondary metabolites Module msim_M00364   C10-C20 isoprenoid biosynthesis, bacteria Brite KEGG Orthology (KO) [BR:msim00001]  09100 Metabolism   09109 Metabolism of terpenoids and polyketides    00900 Terpenoid backbone biosynthesis     MSIM_05620  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:msim01006]     MSIM_05620 Enzymes [BR:msim01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.1  dimethylallyltranstransferase      MSIM_05620     2.5.1.10  (2E,6E)-farnesyl diphosphate synthase      MSIM_05620     2.5.1.29  geranylgeranyl diphosphate synthase      MSIM_05620 Prenyltransferases [BR:msim01006]  Terpene biosynthesis   Prenyl diphosphate synthase    MSIM_05620 SSDB OrthologParalogGFIT Motif Pfam:  polyprenyl_synt Motif Other DBs NCBI-ProteinID:  BBX39111 LinkDB All DBs Position 609075..610280 Genome browser AA seq 401 aa AA seqDB search MPTASPPSTSKPLDGTIFPTGPNTLEGYLALCKEACDREIQRLYGPADPGSHGLYDLILD YPLRGGKALRPALSIATCLGLGGHLEAILPTAATLELYHNAFLIHDDIEDESWWRRGKPT LHIDHGVPIAVNVGDAMLSLSLQPLLDNVERVGLGPALRILRAIAKMTRMTVDGQAIELE WVRSNTWRLDDADYLTMVELKTSWYTFITPLQAGAIAAGAGPERMPPLESLGRHLGAAFQ ITDDLLNLRADPEEYGKEIGGDLWEGKRTLMLLHTLRCAEPSDQQRVVRILAKRRPAPDD ELGLAELLDRLATRGELSQSGRAEIKARLQGHHPSEPKSLSDIRWLYELMQGVGSLQHAR DVAAEHARKAAAALAGLDWLPPSRHRDLLAALVDYVHGRTR NT seq 1206 nt NT seq  +upstreamnt  +downstreamnt atgccaacggcctcgccgccctccacgtctaaacccctagacggcacaatctttccgacg ggccccaatacgctcgagggctacctcgccctgtgcaaggaggcgtgcgaccgggaaatc cagcggctgtacggtcccgcagaccccggctcgcacgggctctacgacctgatcctggac tatcccctgcgcggcggcaaggcgctgagaccggccctgagcatcgccacctgcctggga ctcgggggccatctcgaggcgatacttccgaccgcggccacactcgagctgtatcacaac gcgtttctcatccacgacgatatcgaggacgaatcgtggtggcggcgaggtaaacccaca ttgcacatcgaccacggcgtgccgatcgccgtcaacgtcggcgacgcgatgttgtccctg tcgctacagccgttattggacaacgtcgaacgagtggggcttgggcccgcgctgcgcatc ctgcgcgccatcgccaagatgacccgaatgaccgtcgacggccaggcgatcgaactcgag tgggtccgctccaacacctggcgcctcgatgatgcggactacctcacgatggtggagctc aagaccagctggtacacgttcatcacgccactacaggccggtgcgatcgccgccggcgcc ggacccgagcgaatgcccccactggagtcgctcggtcggcacctcggagcggcctttcag atcaccgacgatttgctgaacctgcgcgcggatcctgaggagtacggcaaggagatcggc ggcgatctctgggagggcaagcggaccctgatgttgctgcacacgctgcgatgcgccgaa ccgagcgaccagcaacgcgtggtgcggattctggccaagcggcgcccggcccccgacgat gaattgggcctcgccgagctactcgaccgacttgcgacccgaggcgaactatcccagtcg ggtcgggccgaaatcaaggcccggctgcagggacaccatccgtcggagccgaagagcctc agcgacattcgctggctctacgaattgatgcagggcgtcggttcgttgcaacacgcccgg gacgtcgccgctgagcatgcccggaaggcggccgccgcgctggccggccttgactggttg ccgcccagccgccaccgggacctgctggccgccctggtcgactatgtgcacggacggacc cgatga

Mycobacterium simiae: MSIM_08600 Help Entry MSIM_08600        CDS       T07396                                  Name (GenBank) polyprenyl synthetase   KO K13787   geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] Organism msim  Mycobacterium simiae Pathway msim00900   Terpenoid backbone biosynthesis msim01100   Metabolic pathways msim01110   Biosynthesis of secondary metabolites Module msim_M00364   C10-C20 isoprenoid biosynthesis, bacteria Brite KEGG Orthology (KO) [BR:msim00001]  09100 Metabolism   09109 Metabolism of terpenoids and polyketides    00900 Terpenoid backbone biosynthesis     MSIM_08600   09110 Biosynthesis of other secondary metabolites    00997 Biosynthesis of various other secondary metabolites     MSIM_08600  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:msim01006]     MSIM_08600 Enzymes [BR:msim01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.1  dimethylallyltranstransferase      MSIM_08600     2.5.1.10  (2E,6E)-farnesyl diphosphate synthase      MSIM_08600     2.5.1.29  geranylgeranyl diphosphate synthase      MSIM_08600 Prenyltransferases [BR:msim01006]  Terpene biosynthesis   Prenyl diphosphate synthase    MSIM_08600 SSDB OrthologParalogGFIT Motif Pfam:  polyprenyl_synt Motif Other DBs NCBI-ProteinID:  BBX39409 LinkDB All DBs Position 939958..941094 Genome browser AA seq 378 aa AA seqDB search MATVRSFPQLRSVAPMPDAVALLADPGQLGAWRQGVRQAVLAEVAEFVAARCAADLGPCG VDVAAEVLTEFVQGGKCLRSTFMYLGWLCGAPPDSAALAAAASLELLQAFALLQDDVMDA SPSRRGRPSAHVQFTEWHRRRGRSGSSQKFGESAAILLGDLCLVWAEQMLRDSGVHQGAL GRAWPRYDAMRTELAVGQFADVATNLRDLPTMESVLAVARMKSGNYTVRRPLEIGAAMAD CDDVVLAGLSEYGAALGEAFQLRDDILGVFGSPTATGKPNGGDLNERKATSVVVAAYQLA DASTRRQFGELINRDRLDADAVEHWRTLILATGSVQFIEELIDDRVATARKALDGRPFDE LALAALIDMTDVCTRRAA NT seq 1137 nt NT seq  +upstreamnt  +downstreamnt gtggcaaccgtgcgttcgtttccccagctccgttccgtggcgccaatgcccgatgccgtt gcgctgctggccgacccgggacaattgggcgcctggcgtcaaggggtgcgacaagcggtg ctggcggaggtggcggagttcgtagcagcgcgttgcgccgcagacctgggcccctgcggg gtcgacgtagcggccgaggtattgaccgaattcgtccagggcggcaaatgcctgcggtcg acgttcatgtacctgggctggctgtgcggcgcaccgccggacagcgcggcgctcgcggcg gccgccagcctggaactgctgcaggcgttcgcgctgctgcaggacgacgtgatggacgca tcgccgtcccggcgcggccgtccgtcagcgcacgtgcaattcaccgagtggcaccggcga cggggtcgttccgggtcgtcgcagaagttcggcgaatcggccgccatcctgctcggcgac ctgtgcctggtgtgggccgagcagatgctgcgcgacagcggtgtgcaccagggggcgctg ggacgcgcctggcctcgctacgacgctatgcgcaccgaactcgcggtcggtcaattcgcc gatgtggcaaccaatctgcgtgatctcccgacgatggaatcggtgctggcggtggcccgg atgaagtccggcaactacacggtgcgccggccgctggagatcggcgccgccatggccgac tgcgacgacgtggtgctagccgggctgagcgagtacggggcggcgctgggcgaagccttt cagctgcgcgacgacattctcggcgtcttcggatcacccacggccaccggcaaacccaac ggcggtgacctgaacgagcgcaaggccaccagtgtcgtggtcgccgcctaccagcttgcc gacgcctccacccgccggcagttcggcgaactgatcaaccgtgaccgcctagacgcggat gccgtcgagcattggcgcacgctgattttggctaccggctccgtgcaattcatcgaggag ttgatcgatgaccgagtagccaccgcacgaaaggcactggacggcagaccgtttgacgag ctggcattggccgcgctgatcgatatgacagacgtgtgcacccggcgggccgcatga

Mycobacterium simiae: MSIM_46150 Help Entry MSIM_46150        CDS       T07396                                  Symbol idsA2 Name (GenBank) geranylgeranyl pyrophosphate synthase   KO K13787   geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] Organism msim  Mycobacterium simiae Pathway msim00900   Terpenoid backbone biosynthesis msim01100   Metabolic pathways msim01110   Biosynthesis of secondary metabolites Module msim_M00364   C10-C20 isoprenoid biosynthesis, bacteria Brite KEGG Orthology (KO) [BR:msim00001]  09100 Metabolism   09109 Metabolism of terpenoids and polyketides    00900 Terpenoid backbone biosynthesis     MSIM_46150 (idsA2)   09110 Biosynthesis of other secondary metabolites    00997 Biosynthesis of various other secondary metabolites     MSIM_46150 (idsA2)  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:msim01006]     MSIM_46150 (idsA2) Enzymes [BR:msim01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.1  dimethylallyltranstransferase      MSIM_46150 (idsA2)     2.5.1.10  (2E,6E)-farnesyl diphosphate synthase      MSIM_46150 (idsA2)     2.5.1.29  geranylgeranyl diphosphate synthase      MSIM_46150 (idsA2) Prenyltransferases [BR:msim01006]  Terpene biosynthesis   Prenyl diphosphate synthase    MSIM_46150 (idsA2) SSDB OrthologParalogGFIT Motif Pfam:  polyprenyl_synt Motif Other DBs NCBI-ProteinID:  BBX43164 LinkDB All DBs Position complement(4921529..4922644) Genome browser AA seq 371 aa AA seqDB search MPRQKGGGALSVKSPAAAATVEFTGAIAEQLRRYLHGRRTETAYIGDDYAALIAALEEFV LSGGKRLRPAFAYWGWRAVTDAEPNSEVLLLFSALELLQACALVHDDVIDDSSTRRGRPT VHVRFATLHRDRKWQGSADRFGISAAILLGDLALAWADDIVFGADLTPATQRRVLRVWSD IRTEVLGGQYLDIVAEASAAESIASAMNVDRFKTACYTVARPLQLGAAAAGDRPDVQAVF AQAGIDLGVAFQLRDDVLGVFGDPAVTGKPSGDDLRSGKRTVLLAEAVELADKSDPLAAN LLRSSIGAPLTDVQVNELREVIESVGALAAAEHRIATLTEGALQALAAAPISAPAKAGLS ELAKAATNRSA NT seq 1116 nt NT seq  +upstreamnt  +downstreamnt atgccgaggcagaaagggggcggcgcgctgagcgtgaaatccccagcagcagcggcaacc gtcgagttcaccggggccattgccgagcaactgcgccgatacctgcacggccggcgtacc gagactgcttacatcggcgacgactacgcggcgttgatcgccgccctagaggagttcgtg ctcagcggcggcaagcggctgcgtccggccttcgcctactggggctggcgcgcggtcacc gatgccgaacccaattccgaagtgctgctgctgttttccgcgctggagctgctacaggcg tgcgcactggtgcatgacgacgtcatcgacgactcctccacccgccgcggccggccgacg gtgcatgtccgcttcgcgacgttgcatcgggatcgaaagtggcagggttcggccgaccga ttcggcatctcggccgcgatcctgctcggcgacctcgccctggcctgggccgacgacatc gtgttcggagcggacctgacgccggcgacgcagcgtcgggtgctgcgggtctggtccgac atccgcaccgaggtgctcggcgggcagtacctcgacatcgtcgccgaggccagcgcggcg gagtcgatcgcgtcggcgatgaacgtcgaccggttcaagacggcctgctacacggtggcg cgtccgctgcagctcggcgccgccgccgccggggaccggcccgacgtgcaagccgtgttc gcccaggccggcatcgacctgggcgtcgcgtttcagcttcgcgacgacgtgctgggagtg ttcggggatccggccgtgacgggcaagccgtccggcgacgatttgcgttccggtaagcgc acggtgttgctggccgaggctgtcgagctagcggacaagtcagacccgttggcggccaac ctgttacggagctcgatcggcgcaccgttgaccgacgtacaggtaaacgagttgcgcgag gtcatcgagtccgtcggcgccctggccgcggccgaacaccgcatcgccaccctcaccgag ggggcgctgcaggcgctggccgccgctcccatcagcgccccggccaaggccgggctgtcc gagctggccaaagcggccaccaaccgatccgcctga

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