Mycobacterium simiae: MSIM_05940
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Entry
MSIM_05940 CDS
T07396
Symbol
sirR
Name
(GenBank) transcriptional regulator
KO
K03709
DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
Organism
msim
Mycobacterium simiae
Brite
KEGG Orthology (KO) [BR:
msim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msim03000
]
MSIM_05940 (sirR)
Transcription factors [BR:
msim03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSIM_05940 (sirR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fe_dep_repr_C
Fe_dep_repress
FeoA
HTH_Crp_2
MarR_2
HTH_27
HVO_A0261_N
HTH_20
HTH_10
HTH_IclR
HTH_24
GntR
HTH_36
MarR
HTH_5
HTH_DeoR
Reovirus_L2_4th
TrmB
Ribosomal_S25
HTH_AsnC-type
WHD_MCM_arc
HTH_1
HTH_CodY
HTH_11
WHD_DUF6293
Rrf2
Motif
Other DBs
NCBI-ProteinID:
BBX39143
LinkDB
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Position
639239..639943
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AA seq
234 aa
AA seq
DB search
MSADDEAGGLTAVGQDYLKVIWNAQEWSPDGTPQKVSTKMLADRIGVSASTASESIRKLA
EQGLVDHAKYGAVSLTEAGRRAALAVVRRHRLLETFLVNELGYGWDEVHDEAEVLEHAVS
ERLVARIDAKLGYPQRDPHGDPIPASDGQIPTPPARQLWVCDDGESATVARISDADPEML
RYFSSVGINLDSRLRVLTRREFAGMISVAIESSDGAETTVDLGSPAARAVWVVA
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgctgacgacgaggctggcggtcttaccgcggtcggccaggactacctcaaggtc
atctggaatgcccaggagtggtcccctgacggcacgccgcagaaagtgagcaccaagatg
ctggccgaccggatcggcgtatcggccagcaccgcatcggagtcgatccgcaaactcgcc
gagcaagggcttgtcgaccacgcgaagtacggcgcggtgagcctgaccgaagccggtcga
cgggcggcgctggcggtggtccgccggcaccggttgctggagaccttcctggtcaacgag
ctgggttacggatgggacgaggttcacgacgaggccgaggtgctcgagcacgcggtgtcg
gagcggctggtggcgcgcatcgacgccaagctcggatacccccaacgcgacccgcacggc
gaccccatcccggcctccgacggccagatacccacacctccggcgcggcagctgtgggtg
tgcgacgacggcgagagcgcgacggtggcgcggatttccgacgccgaccccgaaatgctg
cgctacttctccagcgttgggatcaacctcgactcacggctgcgggtgctgacccggcgg
gaatttgccgggatgatctcggtcgcgatcgaatcgtccgacggcgccgagaccacggtc
gatctgggcagtccggccgcccgggcggtgtgggtggtggcctaa
DBGET
integrated database retrieval system
