Mycobacterium simiae: MSIM_05980
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Entry
MSIM_05980 CDS
T07396
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
msim
Mycobacterium simiae
Brite
KEGG Orthology (KO) [BR:
msim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msim03016
]
MSIM_05980 (truB)
Enzymes [BR:
msim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSIM_05980 (truB)
Transfer RNA biogenesis [BR:
msim03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSIM_05980 (truB)
Prokaryotic type
MSIM_05980 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
PRODH
Motif
Other DBs
NCBI-ProteinID:
BBX39147
LinkDB
All DBs
Position
complement(643573..644493)
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AA seq
306 aa
AA seq
DB search
MSEGSGGPSGPGLVVVDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIDR
ATKILGLLTASAKSYAATIRLGQTTATEDAEGEVRQTISAAHLTDEQIAAAVAGLRGDIE
QVPSAVSAIKVGGRRAYQLVRDGQEVELKARPVRIDRFEILSTRRDAALIDLDVEVDCSA
GTYIRALARDLGTALGVGGHLRALRRTRVGRFELDRARSLDELAERPQLSWTLDEACLLV
FPRRVLTFEEAEATQHGRPLSPAGIDGVYAAADPAGRVIALLRDEGARTKPAVVLRPATM
QDWKSW
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaggctccggcgggcccagcggccccgggttggtcgtcgtggacaagccggcc
ggaatgaccagtcacgacgtcgtgggccgttgccgccgtatcttcgccacccggcgagtt
ggccatgcggggacgctggatccaatggccaccggtgtgctggtgatcgggatcgaccgc
gccaccaagatcctcggcctgttgacggcctcggccaagtcgtatgcggccaccatccgg
ctggggcaaaccaccgccaccgaggatgccgaaggtgaagtccggcaaaccatttcggcc
gcgcatctgacggacgaacagatcgccgccgcggtcgccggacttcgcggcgacatcgaa
caggtgccgtcggcggtcagcgcgatcaaggtcgggggccgtcgcgcctatcaattggtc
cgcgacggccaggaggtcgaactcaaggcccgtccggtgcggattgaccggttcgagatt
ttgtcgacccgccgcgatgccgcactgatagacctcgacgtcgaggtcgactgttcggcg
ggaacctacatccgggcactggcccgtgacctcggcaccgcgctcggcgtgggcgggcac
ctgagggcgctgcggcgcacccgcgtggggcggttcgagctggaccgggcccggtcactc
gacgaattggcggaacggccgcagctgagctggacgctggacgaagcgtgcctgctggtg
ttcccgcggcgggtcctcaccttcgaagaggccgaggccacccaacacggccggcccctg
tcgccggcggggatcgacggtgtctatgcggccgccgatccggccggcagggtgattgcg
ttgctgcgcgacgagggcgcgcggacaaagcccgcggtggtcctccgccccgcgacgatg
caggactggaagtcctggtga
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integrated database retrieval system
