Mycobacterium simiae: MSIM_08120
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Entry
MSIM_08120 CDS
T07396
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
msim
Mycobacterium simiae
Pathway
msim00470
D-Amino acid metabolism
msim00550
Peptidoglycan biosynthesis
msim01100
Metabolic pathways
msim01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
msim00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MSIM_08120 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MSIM_08120 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MSIM_08120 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
msim01011
]
MSIM_08120 (ddl)
Enzymes [BR:
msim01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
MSIM_08120 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
msim01011
]
Precursor biosynthesis
Amino acid ligase
MSIM_08120 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
RimK
Motif
Other DBs
NCBI-ProteinID:
BBX39361
LinkDB
All DBs
Position
complement(886396..887502)
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AA seq
368 aa
AA seq
DB search
MSPKRVRVAIVFGGRSNEHAISCVSAGSILRNLDPQRFEVVAIGITPEGSWVLTDGDPDA
LAITNRRLPGVTVASGTELALPADPRRSGQLVSLSTGAGEVLGSVDVVFPVLHGPYGEDG
TIQGLLELAGVPYVGAGVLSSAVGMDKEFTKKLLAAAGLPVGAHAVLRPSQPTLPPHECE
RLGLPVFVKPARGGSSIGVNRVTNWDELAAAVADARRHDPKVIVEAAINGRELECGVLEM
PDGTIEASTVGEIRVAGVRGREDGFYDFATKYLDDAAELDVPAKVDDDIADTVRQLAIRA
FNAIDCQGLARVDFFLTDDGPVINEVNTMPGFTTISMFPRMWAASGVDYPTLLATMVETA
LARGVGLR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtgtcacccaagcgggtgcgcgtggcgatcgtcttcggcggacgcagcaacgagcatgcg
atctcgtgcgtgtccgcgggcagcatcttgcgcaacctcgatccgcagcgattcgaggtc
gtcgcgatcggcatcacgcccgaaggctcatgggtgcttaccgacggcgacccggacgcg
ctggcgatcaccaaccggcgactgcccggggtgacggtggcctcgggcaccgagttggca
ttgccggccgatccgcgacgcagcggccagttggtgtccttgtcgaccggggccggtgaa
gttctggggtcggtcgacgtggtgttcccggtgctgcacggtccctacggcgaagacggc
accatccaaggactgctcgaattggcgggtgtgccctatgtcggtgccggggtgctgtcc
agcgcggtcgggatggacaaggagttcaccaagaagctgcttgccgccgcgggacttccg
gttggggcgcacgcggtgctgcggccgtcgcaaccgacgctgccgcctcacgagtgcgag
cggctcggcttgcccgtgttcgtcaaacccgctcgcggtggttcctcgatcggcgtcaac
cgggtgacgaattgggacgagctggccgccgcggtcgccgacgcccggcgccatgatccg
aaggtgatcgtggaggccgcgatcaacggacgcgagctggaatgcggcgtgctcgaaatg
ccggacggcacaatagaagccagcacggtcggcgagatccgggtggcgggggtgcgagga
cgcgaggacggcttctacgacttcgcgaccaaatacctcgacgacgcagccgaattggat
gttcccgccaaggtcgacgacgacatcgccgacaccgtacggcaattagcgatccgggcc
ttcaatgccatcgattgccagggcctggcccgggtcgacttcttcctgaccgacgacggg
ccggtgatcaacgaggtcaacacgatgcccgggttcaccacaatctcgatgtttccgagg
atgtgggcggccagcggcgtggactatcccaccctgctggcgacgatggtcgagaccgcg
ttggcccggggcgtcggcctgcgctaa
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