Mycobacterium simiae: MSIM_11260
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Entry
MSIM_11260 CDS
T07396
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msim
Mycobacterium simiae
Brite
KEGG Orthology (KO) [BR:
msim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msim03032
]
MSIM_11260
03400 DNA repair and recombination proteins [BR:
msim03400
]
MSIM_11260
Enzymes [BR:
msim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MSIM_11260
DNA replication proteins [BR:
msim03032
]
Prokaryotic type
DNA Topoisomerases
MSIM_11260
DNA repair and recombination proteins [BR:
msim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSIM_11260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BBX39675
LinkDB
All DBs
Position
1218647..1219702
Genome browser
AA seq
351 aa
AA seq
DB search
MRLRRSVLDGPGIARKRRGKGFAYYNSDGEPVADHATLQRIKDLVIPPAWKKVWICPHPN
GHIQAVGTDAAGRRQYLYHSAWQQERAEEKFDRVLELSTRLPSFRQHIVADLSRRGMSRE
RVLALGLRLLDRGYFRSGGEQYAEEHESYGIATLLREHVTVRRDAVAFDYPAKSGVQRTV
EVQDAAVVRAVRALMRSAERSERLLVYRNTSGWTELRADDLNARFKEIVGDDFTVKDLRT
WHGTVLAAVAFADADPPVSQRVIKRVESAVMKEVAEGLGNTPAVARGSYVDPRVVTGYEQ
ELTIAAATTRAERARQPDDAQEILEKATRALIRRVAKGGSMSHTAALAKTA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgcgacgaagcgtgctcgacgggcccggaatcgcccgtaagcgtcggggcaag
gggttcgcctactacaacagtgatggcgagccggtggccgaccatgcgaccctgcagcgg
atcaaggatctggtgattccacctgcctggaagaaggtgtggatctgccctcatccgaac
ggccacattcaggcggtcggcaccgacgcggccgggcgccgtcagtacctttaccactcc
gcatggcagcaggagcgcgccgaggaaaaattcgaccgtgtcctggaactgtccacccgg
ttgccgagttttcgccagcacattgtcgccgacctgtcccggcgcggaatgtcgcgcgag
cgcgtactggcgctggggttgcgattgctggaccgtggttacttccgctccggcggagag
caatacgccgaggaacacgaatcctacggaatcgcgaccctgctgcgtgagcacgtgacg
gtgcgccgcgatgcggtcgctttcgattaccccgccaagagcggggtgcagcgcaccgtg
gaggtgcaggatgctgccgtggtccgcgcggtgcgcgcgctgatgcgcagtgccgaacgc
agtgaacgattgctggtgtaccgcaacacgtccggatggaccgagctgcgagccgacgac
ctcaatgcccggttcaaggaaatcgttggcgacgatttcaccgtcaaggatctgcggacc
tggcatggaacggtgctggcggccgtggcgttcgccgacgcagatcccccggtgtcacaa
cgggtgatcaagcgagtcgaatcggcggtgatgaaggaggtggccgaagggttgggcaac
acgcccgcggtggcacgcggttcgtatgtggatccccgtgtcgtcaccggctacgaacag
gagctcaccatcgccgcggcaaccacgcgcgccgagcgggctcgccagccggacgacgcc
caggagattctggaaaaggcgactcgtgcgctgatccggcgagtggccaagggcggcagc
atgtctcacactgccgccctggcgaaaaccgcgtga
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