Mycobacterium simiae: MSIM_12070
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Entry
MSIM_12070 CDS
T07396
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msim
Mycobacterium simiae
Pathway
msim03420
Nucleotide excision repair
msim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSIM_12070 (uvrD2)
03430 Mismatch repair
MSIM_12070 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msim03400
]
MSIM_12070 (uvrD2)
Enzymes [BR:
msim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSIM_12070 (uvrD2)
DNA repair and recombination proteins [BR:
msim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSIM_12070 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
MSIM_12070 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_11
ORC-CDC6-like
ResIII
Motif
Other DBs
NCBI-ProteinID:
BBX39756
LinkDB
All DBs
Position
complement(1303728..1305929)
Genome browser
AA seq
733 aa
AA seq
DB search
MGPAVASPRTPAAGRRGDTPDLSATAAKMDGMPAVADPLIAGLDDEQREAVLAPRGPVCV
LAGAGTGKTRTITHRIAQLVANGHVAAAQVLAVTFTQRAAGEMRSRLRSLDAATHNGAGV
GGVQALTFHSAAHRQLRYFWPRVVGDTGWQLLDTKFAVVARAASRSRLNVSTDDVRDLAG
EIEWAKASLITPEAYPAAVAAAARDIPLDANKIAEIYAAYEALKTRDESVTLLDFDDLLL
HTAAAIENDVAVAEEFRDRYRCFVVDEYQDVTPLQQRVLSAWLGDRDDLTVVGDANQTIY
SFTGASPRFLLDFSRQFPDATVVRLERDYRSTPQVVSLANQVIAAARGRVAGSKLQLSGQ
RPPGPVPSFHEHPDEAAEAAAVAKTIGGLIESGTPPSEIAVLYRVNAQSEIYEEALTEAN
IAYQVRGGEGFFTRQEIKQALAALHRAAERADGSPATTPLPDVVRAILEPLGLTVKEPVG
TRARERWEALSALAELVDDEVVQRPELDLRGLVAELRIRADARHPPVVQGVTLASLHAAK
GLEWDAVFLVGLADGTVPISHALAHGPESEPVEEERRLLYVGITRARVHLALSWALSRSP
GGRQSRKPSRFLNGIAPQASVAAGAGKPRRKPGASRCRICNSNLTTPAAVMLRRCETCSA
DIDEKLLLRLKEWRLDVAKEQKVPAYVVFTDNTLIAIAELLPDDETALIAIPGIGARKLE
QYGADVLQLVRDR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
ttggggccggccgtggccagtccgaggacacccgcggcgggtcggcgtggcgacacgccc
gatttgtcggccaccgctgccaagatggacggcatgccggcggtggccgacccgttgatc
gcgggactggatgacgagcagcgtgaggccgtgctcgcgccgcgcgggccggtgtgtgtc
ctggcgggggccggaacgggcaagacccgcacgatcacccaccgcatcgcccagctggtg
gccaacggacacgttgcggccgcgcaagtacttgcggtcacgttcacccagcgcgcggcg
ggggagatgcggtcccggctgcggtcgctggacgcagccacacacaacggggcgggcgtc
ggtggggtgcaggcgttgacctttcactcggccgcccaccgccagctccgttacttctgg
cctcgggtggtcggtgacaccggctggcaactgctggataccaaattcgccgtcgtggcc
agggcggccagccgcagcaggctgaatgtcagcaccgacgacgtgcgtgatttggccggc
gagatcgagtgggccaaagcgtcgctgatcacgcccgaggcgtatccggccgcggtggcc
gctgccgcccgggacattccactcgacgccaacaagatcgccgagatctacgccgcctac
gaggcactcaagacgcgcgacgaatcggtgacgctgctcgacttcgacgacctgttgttg
cacaccgcggcggcgatcgagaacgacgtcgcggtcgccgaggagttccgcgaccgttac
cgctgcttcgtcgtcgacgagtaccaggacgtcacgccgctgcagcagcgagtgctgtcg
gcctggctgggcgatcgggacgacctgacggtggtcggcgacgccaatcagaccatctat
tcgttcaccggtgcctcgccgcgattcctgctcgacttctcgcggcagtttcccgatgcc
acggtggtgcgcctggaacgtgactatcgctccaccccgcaggtcgtctcgctggccaac
caggtgatcgccgccgcacgagggcgcgtcgcgggcagcaaactacaactgtccggtcag
cgtccgccgggcccggtgccgtcgtttcacgagcaccccgacgaagccgccgaagctgcc
gcggtggccaagacgatcggcgggctgatcgaatccggcactccgccatcagagatcgcg
gtgctctaccgtgtcaacgcccaatccgagatctacgaggaagcgctgaccgaggccaat
atcgcctaccaggttcgcggcggcgaagggtttttcacccgccaggaaatcaagcaggcg
ctggcggctctgcaccgcgccgccgagcgcgcggacggcagccccgcgacgacgccgctg
cccgacgtcgtccgcgcgattctcgaaccgctcgggctcaccgtcaaggaaccggtcggc
acccgggcccgcgagcgctgggaggcgctcagcgcgctggcggaactggtcgacgacgag
gtggtgcaacggcccgagctggatttgcgcggcctggtggccgagctgcggatccgggcc
gacgcgcggcacccaccggtggtacagggggtcactctggcgtcgctgcacgccgccaag
gggctggagtgggacgcggtatttctggtcggattggccgacggcaccgtgcccatctcg
cacgctttggcgcacgggccggagagcgaaccggtcgaggaggagcgccgtctcctctac
gtcggaatcactagggcccgagtgcatttggcgctcagttgggcgttgtcgcgcagtccg
ggcggaaggcagagccgaaagccgtcgaggttcctcaacggcatcgcgccgcaagccagc
gtggcggcgggagcaggcaaaccccggcgcaaaccgggcgcttcgcgatgccggatctgc
aacagcaacctgaccaccccggcggccgtcatgctgcggcgttgcgagacatgcagcgcc
gacatcgacgaaaagctgttgttgcggctcaaggagtggcggctggacgtcgccaaggaa
cagaaggtgcccgcgtacgtcgtgttcaccgacaacaccctgatcgcgatcgctgaactg
ctgcccgacgacgagaccgccctgatcgcgattccgggcatcggcgcgcgcaagctcgag
cagtacggggccgatgtgctgcaattggtacgcgaccgatag
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integrated database retrieval system
