Mycobacterium simiae: MSIM_18110
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Entry
MSIM_18110 CDS
T07396
Symbol
groL_1
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
msim
Mycobacterium simiae
Pathway
msim03018
RNA degradation
msim05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
msim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSIM_18110 (groL_1)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
MSIM_18110 (groL_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msim03019
]
MSIM_18110 (groL_1)
03110 Chaperones and folding catalysts [BR:
msim03110
]
MSIM_18110 (groL_1)
03029 Mitochondrial biogenesis [BR:
msim03029
]
MSIM_18110 (groL_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msim04147
]
MSIM_18110 (groL_1)
Enzymes [BR:
msim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MSIM_18110 (groL_1)
Messenger RNA biogenesis [BR:
msim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MSIM_18110 (groL_1)
Chaperones and folding catalysts [BR:
msim03110
]
Heat shock proteins
HSP60 / Chaperonin
MSIM_18110 (groL_1)
Mitochondrial biogenesis [BR:
msim03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MSIM_18110 (groL_1)
Exosome [BR:
msim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSIM_18110 (groL_1)
Exosomal proteins of other body fluids (saliva and urine)
MSIM_18110 (groL_1)
Exosomal proteins of breast cancer cells
MSIM_18110 (groL_1)
Exosomal proteins of colorectal cancer cells
MSIM_18110 (groL_1)
Exosomal proteins of bladder cancer cells
MSIM_18110 (groL_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BBX40360
LinkDB
All DBs
Position
complement(1930113..1931738)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKTIAYDEEARRGLERGLNSLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPLGLKRGIE
KAVEKVTETLLKSAKDVETKDQIAATAAISAGDQSIGDLIAEAMDKVGNEGVITVEESNT
FGLQLELTEGMRFDKGYISGYFVTDAERQEAVLEDPFILLVSSKVSTVKDLLPLLEKVIQ
AGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVIS
EEVGLTLENADISLLGKARKVVITKDETTIVEGAGDTDAIAGRVAQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
APALDDLGLTGDEATGANIVRVALSAPLKQIAFNSGLEPGVVAEKVTNSPAGTGLNAATG
EYEDLLKAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEKAAAPAGDPTGGMGGMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagacaattgcgtacgacgaagaggcccgtcgcggcctcgagcggggcttgaac
agcctcgccgacgcggtaaaggtgacgttgggtcccaagggccgcaacgtcgtgctggag
aagaagtggggcgctcccacgatcaccaacgatggtgtgtccatcgccaaggagatcgag
ctggaggacccctacgagaagatcggcgctgagctggtcaaggaagtcgccaagaagacc
gacgacgtcgccggtgacggcaccacgacggccaccgtgctcgctcaggcgctcgtcaag
gagggcctgcgcaacgtggcggccggcgccaacccgctgggcctcaagcgcggcatcgag
aaggccgtcgaaaaggtcaccgagacgctgctgaagtcggccaaggatgtcgagaccaag
gaccagatcgctgccaccgccgcgatttccgcgggcgaccagtcgatcggcgacctgatc
gccgaggcgatggacaaggtcggcaacgagggcgtcatcaccgtcgaggagtccaacacc
ttcgggctgcagctcgagctcaccgagggtatgcgcttcgacaagggctacatctcgggc
tacttcgtcaccgacgccgagcgtcaggaagccgtcctggaggacccgttcatcctgctg
gtcagctccaaggtgtcgacggtcaaggacctgctgccgctgctggagaaggtcatccag
gccggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggcgctgagcaccctg
gtcgtcaacaagatccgtggcaccttcaagtcggtggccgtcaaggctcccggcttcggt
gaccgccgcaaggcgatgctgcaggacatggcgatcctcaccggtggtcaggtcatcagc
gaggaggtcggcctgaccctggagaacgccgacatctcgctgctcggcaaggcccgcaag
gtcgtcatcaccaaggacgagaccaccatcgtcgagggcgccggtgacaccgacgccatc
gccggccgggtggcgcagatccgcgccgagatcgagaacagcgactccgactacgaccgc
gagaagctgcaggagcgtctggccaagctggccggcggtgttgcggtgatcaaggccggg
gccgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgcggtccgcaac
gccaaggcggctgtcgaggagggcatcgtcgccggtggtggcgtggccctgctgcaggcg
gctcccgccctggacgacctcggcctgaccggcgacgaggccaccggtgccaacatcgtc
cgcgtggcgctgtcggctccgctgaagcagatcgccttcaactccgggctggagcccggc
gttgtcgccgagaaggtcaccaactcgcccgccggcaccggcctgaacgccgccaccggc
gagtacgaggacctgctcaaggccggcgttgccgacccggtcaaggtcacccgttcggcg
ctgcagaacgcggcgtccatcgcgggcctgttcctgaccaccgaggccgtcgttgccgac
aagccggagaaggccgcggctcccgccggcgacccgaccggtggcatgggcggcatggac
ttctaa
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