KEGG   Mycobacterium simiae: MSIM_18110
Entry
MSIM_18110        CDS       T07396                                 
Symbol
groL_1
Name
(GenBank) 60 kDa chaperonin
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
msim  Mycobacterium simiae
Pathway
msim03018  RNA degradation
msim05152  Tuberculosis
Brite
KEGG Orthology (KO) [BR:msim00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MSIM_18110 (groL_1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    MSIM_18110 (groL_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msim03019]
    MSIM_18110 (groL_1)
   03110 Chaperones and folding catalysts [BR:msim03110]
    MSIM_18110 (groL_1)
   03029 Mitochondrial biogenesis [BR:msim03029]
    MSIM_18110 (groL_1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msim04147]
    MSIM_18110 (groL_1)
Enzymes [BR:msim01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     MSIM_18110 (groL_1)
Messenger RNA biogenesis [BR:msim03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     MSIM_18110 (groL_1)
Chaperones and folding catalysts [BR:msim03110]
 Heat shock proteins
  HSP60 / Chaperonin
   MSIM_18110 (groL_1)
Mitochondrial biogenesis [BR:msim03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    MSIM_18110 (groL_1)
Exosome [BR:msim04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MSIM_18110 (groL_1)
  Exosomal proteins of other body fluids (saliva and urine)
   MSIM_18110 (groL_1)
  Exosomal proteins of breast cancer cells
   MSIM_18110 (groL_1)
  Exosomal proteins of colorectal cancer cells
   MSIM_18110 (groL_1)
  Exosomal proteins of bladder cancer cells
   MSIM_18110 (groL_1)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: BBX40360
LinkDB
Position
complement(1930113..1931738)
AA seq 541 aa
MAKTIAYDEEARRGLERGLNSLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPLGLKRGIE
KAVEKVTETLLKSAKDVETKDQIAATAAISAGDQSIGDLIAEAMDKVGNEGVITVEESNT
FGLQLELTEGMRFDKGYISGYFVTDAERQEAVLEDPFILLVSSKVSTVKDLLPLLEKVIQ
AGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVIS
EEVGLTLENADISLLGKARKVVITKDETTIVEGAGDTDAIAGRVAQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
APALDDLGLTGDEATGANIVRVALSAPLKQIAFNSGLEPGVVAEKVTNSPAGTGLNAATG
EYEDLLKAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEKAAAPAGDPTGGMGGMD
F
NT seq 1626 nt   +upstreamnt  +downstreamnt
atggccaagacaattgcgtacgacgaagaggcccgtcgcggcctcgagcggggcttgaac
agcctcgccgacgcggtaaaggtgacgttgggtcccaagggccgcaacgtcgtgctggag
aagaagtggggcgctcccacgatcaccaacgatggtgtgtccatcgccaaggagatcgag
ctggaggacccctacgagaagatcggcgctgagctggtcaaggaagtcgccaagaagacc
gacgacgtcgccggtgacggcaccacgacggccaccgtgctcgctcaggcgctcgtcaag
gagggcctgcgcaacgtggcggccggcgccaacccgctgggcctcaagcgcggcatcgag
aaggccgtcgaaaaggtcaccgagacgctgctgaagtcggccaaggatgtcgagaccaag
gaccagatcgctgccaccgccgcgatttccgcgggcgaccagtcgatcggcgacctgatc
gccgaggcgatggacaaggtcggcaacgagggcgtcatcaccgtcgaggagtccaacacc
ttcgggctgcagctcgagctcaccgagggtatgcgcttcgacaagggctacatctcgggc
tacttcgtcaccgacgccgagcgtcaggaagccgtcctggaggacccgttcatcctgctg
gtcagctccaaggtgtcgacggtcaaggacctgctgccgctgctggagaaggtcatccag
gccggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggcgctgagcaccctg
gtcgtcaacaagatccgtggcaccttcaagtcggtggccgtcaaggctcccggcttcggt
gaccgccgcaaggcgatgctgcaggacatggcgatcctcaccggtggtcaggtcatcagc
gaggaggtcggcctgaccctggagaacgccgacatctcgctgctcggcaaggcccgcaag
gtcgtcatcaccaaggacgagaccaccatcgtcgagggcgccggtgacaccgacgccatc
gccggccgggtggcgcagatccgcgccgagatcgagaacagcgactccgactacgaccgc
gagaagctgcaggagcgtctggccaagctggccggcggtgttgcggtgatcaaggccggg
gccgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgcggtccgcaac
gccaaggcggctgtcgaggagggcatcgtcgccggtggtggcgtggccctgctgcaggcg
gctcccgccctggacgacctcggcctgaccggcgacgaggccaccggtgccaacatcgtc
cgcgtggcgctgtcggctccgctgaagcagatcgccttcaactccgggctggagcccggc
gttgtcgccgagaaggtcaccaactcgcccgccggcaccggcctgaacgccgccaccggc
gagtacgaggacctgctcaaggccggcgttgccgacccggtcaaggtcacccgttcggcg
ctgcagaacgcggcgtccatcgcgggcctgttcctgaccaccgaggccgtcgttgccgac
aagccggagaaggccgcggctcccgccggcgacccgaccggtggcatgggcggcatggac
ttctaa

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