Mycobacterium simiae: MSIM_27190
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Entry
MSIM_27190 CDS
T07396
Name
(GenBank) DNA polymerase III, subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
msim
Mycobacterium simiae
Pathway
msim03030
DNA replication
msim03430
Mismatch repair
msim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSIM_27190
03430 Mismatch repair
MSIM_27190
03440 Homologous recombination
MSIM_27190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msim03032
]
MSIM_27190
03400 DNA repair and recombination proteins [BR:
msim03400
]
MSIM_27190
Enzymes [BR:
msim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSIM_27190
DNA replication proteins [BR:
msim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSIM_27190
DNA repair and recombination proteins [BR:
msim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSIM_27190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
DNAX_ATPase_lid
DnaX_C
AAA_30
Mg_chelatase
AAA_19
AAA_16
Rad17
AAA_14
AAA_18
Herpes_Helicase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BBX41268
LinkDB
All DBs
Position
2898040..2899962
Genome browser
AA seq
640 aa
AA seq
DB search
MALYRKYRPATFAEVVGQEHVTEPLSIALEAGRINHAYLFSGPRGCGKTSSARILARSLN
CVQGPTATPCGVCDSCQALAPNAPGSIDVVELDAASHGGVDDTRELRDRAFYAPAQSRYR
VFIVDEAHMVTTAGFNALLKIVEEPPEHLIFIFATTEPEKVLPTIRSRTHHYPFRLLPPK
TMRSLIGRICEQEGVVVDDAVYPLVIRAGGGSPRDTLSVLDQLVAGADDNHVTYPRALGL
LGATDVALIDDAVDALAAADAAALFGAVESVIDAGHDPRRFATDLLERFRDLLVLQAVPD
AVSRGVVDAPEDVLDRMREQAARIGPATLTRYAEVVQAGLGEMRGATAPRLLLEVVCARL
LLPSASDAESALLQRVERIETRLAMSLPASETTPAARPPATAAPAGPPASATPSRRVKAE
RTPGPASEPAPTPPPVNEPPPASEPASRPQPMNEPPPAPTPQPVAAQPAREPGPEPGPGS
GELNAAAVRTMWPTVRDKVRQRSRTTEVMLSGATVRAIDGDTLVLSHESAPLAKRLSEQR
NADVIAEALKDALGVNWRVRCEVGGPAAAAAEAPVRGGPTPPPAAEPPPVAAAESAQRDE
EEHMLAEAGRSDPSAPRRDPEEVALELLQNELGARRIDGS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
gtggctctctaccgcaagtaccggccggcaaccttcgccgaagtggtcgggcaagagcac
gtcaccgagccgctgtccattgccctggaggcggggcggatcaaccatgcgtacctgttc
tccgggccgcggggctgcggcaaaacctcgtcggctcgcatcctggcgcgctcgttgaac
tgcgtgcaggggccgacggcgaccccatgcggcgtgtgcgattcctgtcaggcgctggcg
ccgaacgcgcccggcagcatcgacgtcgtggagctcgacgccgccagtcacggcggcgtg
gacgacacccgtgaactacgcgaccgcgccttctacgcaccggcgcagtcgcggtatcgg
gtgttcatcgtcgacgaggcgcacatggtgaccacggcgggcttcaacgctctgctcaag
atcgtcgaggaaccgcccgagcacctcatcttcatcttcgctaccaccgaaccggagaag
gtgctgccgaccatccgatcgcgcacgcatcactatccgttccggttgttgccgcccaag
acgatgcggtcgctgatcggtcggatctgtgagcaagaaggcgtcgtcgtcgacgacgcg
gtctatccgctggtgatccgcgcgggcggtggttccccgcgcgacaccctctcggtgcta
gaccagttggtggccggcgccgacgacaatcacgtcacctatccccgggccctgggcctg
ctgggcgccaccgacgtcgcgctgatcgacgacgccgtcgacgcgctggccgccgcggac
gccgcggcactgttcggggcggtcgaatcggtgatcgacgcgggccatgacccgcgtcgc
ttcgccaccgacctgctggagcggttccgcgatctccttgtgctgcaagcggttccggac
gccgtgagtcgcggcgtggtggacgccccggaggacgtgctggaccgcatgcgcgagcag
gcggcccgaatcgggccggcgacgctgacccggtacgccgaggtggtgcaggccggactg
ggggagatgcgcggagcgacggcaccgcggctgctcctcgaagtcgtctgcgctcgcctg
ctgttgccgtcggcgagcgacgccgaatcggcgctgctgcagcgcgttgagcgcatcgag
acgcgattggcgatgtcgctgcccgcgtcggaaacgacgccggcggcaaggccgcccgca
acggcggccccggcgggtccgccagcatcggcaacgccgtcgcggcgagtgaaggccgag
cgcacgcccgggcccgcatctgagcccgcgccgacgccgccgcccgtgaacgagccgccg
cccgcatctgagcccgcgtcgaggccgcagcccatgaacgagccgccgcccgcgccgacg
ccgcagccggtcgctgcccaaccggcccgtgaaccaggccctgaaccaggccccggctca
ggcgaactcaacgccgccgcggtgcgcacgatgtggccgacggtgcgcgacaaagtgcgc
cagcgcagccgcaccaccgaagtgatgctgtctggggccaccgttcgcgcgatcgacggc
gacaccctggtgctcagccacgaatcggcgcccctggccaaacggctgtccgagcagcgc
aacgccgacgtcatcgccgaggcactcaaggacgcgctcggcgtcaattggcgggtgcgc
tgcgaggtgggcggcccggctgccgcggcggcggaagcgccggtgcgaggcggcccaacc
ccgccgcccgccgcggagccgcccccggtggcggccgccgaatccgctcaacgcgacgaa
gaggagcacatgctggccgaggccggtcgcagcgatccgtcggcgccgcgccgggacccc
gaagaggttgcgctcgagttgttgcagaacgaattaggcgcgcggcggatcgacggcagc
tag
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