Mycobacterium simiae: MSIM_29230
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Entry
MSIM_29230 CDS
T07396
Name
(GenBank) TetR family transcriptional regulator
KO
K22108
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
msim
Mycobacterium simiae
Brite
KEGG Orthology (KO) [BR:
msim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msim03000
]
MSIM_29230
Transcription factors [BR:
msim03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
MSIM_29230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_24
TetR_N
TetR_C_11
TetR_C_29
TetR_C_4
TetR_C_17
TetR_C_13
Motif
Other DBs
NCBI-ProteinID:
BBX41472
LinkDB
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Position
3125593..3126201
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AA seq
202 aa
AA seq
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MDRVTGQANSRRDELLELAARMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDE
VLRSFLDWLFARYREIIEAQANPLERLKGLFMASFEAIEHRHAQVVIYQDEAQRLLAQPR
FAYIEDMNRQQRKMWVELLHQGVDEGYFRPDLDVDLVYRFIRDTTWVSVRWYRPGGPLTA
EQVGRQYLAIVLGGITAEVSKE
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgtgaccggtcaggccaatagtcgacgagacgagttgctcgaactcgccgcg
aggatgttcgccgaacgcggactgcgggccaccacggtgcgggacatcgccgatggcgcc
gggattttgtcggggagcctgtatcaccattttgcctcgaaagaggagatggtcgacgaa
gtgctgcgcagcttcctggactggctgttcgcccgatatcgcgaaatcatcgaggcgcag
gccaatcccctggagcggctcaagggactgttcatggcgtcgttcgaagcgatcgagcat
cggcacgcgcaggtcgtcatctatcaggacgaagcccagcggctgttggcccaaccacgg
ttcgcctatatcgaggacatgaatcgccagcagcgcaagatgtgggtcgagttgctgcat
caaggtgtcgacgagggctacttccggcccgacctcgacgtcgatcttgtctaccgtttc
atccgcgacaccacctgggtgtcggtgcgctggtatcgacccggcgggccactcaccgcc
gaacaagtgggtcggcaatatctcgccatcgtgctcggtgggatcacggccgaagtttcc
aaggaataa
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integrated database retrieval system
